Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3786

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3785: 12153 - K15178 RTF1 RNA polymerase-associated protein RTF1, at 575682 to 577961 12153 mRNA_3786: 12154 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 578477 to 580207 12154 mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581185 to 583154 12155

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
578,064 + 0.4
578,071 - -0.3
578,079 + -0.8
578,086 - 1.4
578,096 + -0.9
578,102 + -0.3
578,201 - -0.9
578,223 + 0.4
578,943 - 12154 mRNA_3786 0.27 0.9
579,517 - 12154 mRNA_3786 0.60 2.0
579,530 + 12154 mRNA_3786 0.61 2.9
579,651 - 12154 mRNA_3786 0.68 1.3
579,775 - 12154 mRNA_3786 0.75 -0.2
579,932 - 12154 mRNA_3786 0.84 1.5
579,966 - 12154 mRNA_3786 0.86 1.6
580,073 - 3.6
580,256 + -2.2
580,264 + 0.3
580,386 - -0.8
580,390 - 0.1
580,395 - 0.4
580,397 + 0.6
580,398 + -0.7
580,399 + -0.9
580,403 - -1.6
580,405 - 0.1
580,408 - 2.3
580,421 + -1.1
580,449 - 0.3
580,485 - -0.8
580,597 - 1.2
580,693 + 1.1
580,791 + -1.7
580,797 + -4.2
580,797 - -0.7
580,798 + -2.7
580,799 - 0.7
580,805 + -1.1
580,806 - -1.0
580,807 + -0.0
580,807 - -1.7
580,809 - -0.7
580,813 + 0.7
580,813 + -0.5
580,817 - -0.3
580,818 + -0.2
580,822 - 3.0
580,826 + -1.4
580,828 + 0.3
580,829 + -0.1
580,837 + -0.0
580,841 + -0.7
580,845 - -2.7
580,964 - -1.3
580,964 - -3.1
580,979 + 0.2