Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3767

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3766: 12134 - K20372 TBC1D20, GYP8 TBC1 domain family member 20, at 534427 to 536780 12134 mRNA_3767: 12135 - KOG4535 HEAT and armadillo repeat-containing protein, at 536936 to 539895 12135 mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540069 to 541238 12136

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
535,949 + 12134 mRNA_3766 0.65 -0.1
535,956 + 12134 mRNA_3766 0.65 -1.4
536,212 - 12134 mRNA_3766 0.76 1.1
536,385 - 12134 mRNA_3766 0.83 -2.3
536,522 + 12134 mRNA_3766 0.89 -1.2
536,556 + 0.3
536,650 + 0.8
536,673 - -1.3
536,710 + -0.3
536,814 - 0.0
536,816 - -2.4
537,440 - 12135 mRNA_3767 0.17 -0.5
537,575 - 12135 mRNA_3767 0.22 -0.1
537,581 + 12135 mRNA_3767 0.22 0.1
538,147 - 12135 mRNA_3767 0.41 -1.1
538,308 + 12135 mRNA_3767 0.46 -0.5
538,438 + 12135 mRNA_3767 0.51 -1.0
538,438 + 12135 mRNA_3767 0.51 -0.5
538,465 - 12135 mRNA_3767 0.52 -3.8
538,753 - 12135 mRNA_3767 0.61 -0.2
538,777 - 12135 mRNA_3767 0.62 0.0
538,919 + 12135 mRNA_3767 0.67 0.8
539,315 - 12135 mRNA_3767 0.80 0.1
539,363 - 12135 mRNA_3767 0.82 -2.9
539,478 - 12135 mRNA_3767 0.86 0.5
539,495 + 12135 mRNA_3767 0.86 -0.2
539,791 - -0.3
539,795 + -0.9
539,801 + 1.4
539,920 - -0.2
539,934 + 0.1
540,158 - 0.1
540,198 - 12136 mRNA_3768 0.11 -0.2
540,498 + 12136 mRNA_3768 0.37 0.1
540,656 + 12136 mRNA_3768 0.50 0.9
540,840 + 12136 mRNA_3768 0.66 -0.6