Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3753

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3752: 12120 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 503579 to 505478 12120 mRNA_3753: 12121 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 505655 to 508720 12121 mRNA_3754: 12122 - K01641 E2.3.3.10 hydroxymethylglutaryl-CoA synthase, at 509040 to 510998 12122

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
504,708 + 12120 mRNA_3752 0.59 -0.4
504,779 - 12120 mRNA_3752 0.63 1.3
504,806 + 12120 mRNA_3752 0.65 0.1
504,861 - 12120 mRNA_3752 0.67 0.2
505,449 + -2.1
505,736 - 0.0
505,880 - -4.2
506,282 + 12121 mRNA_3753 0.20 -2.3
506,299 - 12121 mRNA_3753 0.21 -5.4
506,301 - 12121 mRNA_3753 0.21 -3.8
506,745 + 12121 mRNA_3753 0.36 -4.6
506,854 + 12121 mRNA_3753 0.39 -3.8
506,858 - 12121 mRNA_3753 0.39 -3.3
506,935 + 12121 mRNA_3753 0.42 -3.5
507,015 - 12121 mRNA_3753 0.44 -3.5
507,156 + 12121 mRNA_3753 0.49 -4.8
507,171 + 12121 mRNA_3753 0.49 -2.8
507,605 - 12121 mRNA_3753 0.64 -4.6
507,921 + 12121 mRNA_3753 0.74 -4.8
508,037 - 12121 mRNA_3753 0.78 -3.4
508,187 - 12121 mRNA_3753 0.83 -5.7
508,197 + 12121 mRNA_3753 0.83 -2.5
508,205 + 12121 mRNA_3753 0.83 -2.3
508,209 + 12121 mRNA_3753 0.83 -1.0
508,217 + 12121 mRNA_3753 0.84 -3.6
508,334 + 12121 mRNA_3753 0.87 -1.9
508,337 - 12121 mRNA_3753 0.87 -4.0
508,339 - 12121 mRNA_3753 0.88 -3.0
508,352 + 12121 mRNA_3753 0.88 -4.1
508,451 + -4.1
508,475 - -3.2
508,488 - -2.3
508,522 + -2.2
508,624 + -1.6
508,639 - -0.5
508,642 - -4.9
508,648 - -3.0
508,739 + -3.8
508,776 - -0.7
508,778 - 0.0
508,785 - -0.8
508,934 + -2.1
508,948 + -0.1
509,099 + 0.9