Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3708

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403479 to 405078 12075 mRNA_3708: 12076 - Hypothetical Protein, at 405406 to 406282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406586 to 407790 12077

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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405,145 + 1.1
405,150 - 0.7
405,159 + 0.1
405,179 + -1.6
405,290 - 0.9
405,296 - -0.8
405,322 - 0.3
405,519 + 12076 mRNA_3708 0.13 -0.0
405,721 + 12076 mRNA_3708 0.36 -0.4
405,768 + 12076 mRNA_3708 0.41 0.9
405,898 + 12076 mRNA_3708 0.56 -0.5
405,907 - 12076 mRNA_3708 0.57 -0.8
406,186 - 12076 mRNA_3708 0.89 0.1
406,199 + -0.4
406,214 + -1.1
406,235 - -0.4
406,257 + -0.3
406,344 + -0.9
406,345 + 0.1
406,349 + -0.3
406,355 - 0.4
406,357 - -0.6
406,359 - -2.2
406,361 - -0.4
406,364 - 0.8
406,371 + -2.3
406,383 - -1.1
406,383 - 0.0
406,386 + -0.3
406,389 + -1.8
406,393 - -0.8
406,400 - -3.3
406,401 + 1.3
406,419 + -2.8
406,433 - 0.5
406,433 + -0.2
406,452 - 0.3
406,453 + 0.1
406,458 - 0.2
406,465 - 0.2
406,471 + -2.7
406,487 - 0.2
406,490 + -0.1
406,490 - -0.5
406,494 + -2.1
406,494 + -1.9
406,494 + -1.7
406,495 + 0.2
406,498 + -2.6
406,500 + -0.7
406,503 - -0.8
406,507 - 0.1
406,508 - 0.5
406,509 + -0.4
406,509 + 1.3
406,520 + -0.8
406,520 - -0.2
406,521 - -3.0
406,647 - 0.4
406,688 + 1.4
406,796 + 12077 mRNA_3709 0.17 -1.1
406,803 + 12077 mRNA_3709 0.18 1.0
406,921 + 12077 mRNA_3709 0.28 -0.6
406,951 + 12077 mRNA_3709 0.30 0.6
407,087 - 12077 mRNA_3709 0.42 0.1
407,251 + 12077 mRNA_3709 0.55 -1.5