Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3556

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3555: 11923 - Hypothetical Protein, at 37536 to 38312 11923 mRNA_3556: 11924 - KOG0254 Predicted transporter (major facilitator superfamily), at 38444 to 40817 11924 mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41446 to 43898 11925

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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37,505 + 0.6
37,550 - 0.1
37,558 - -0.3
37,568 - -0.3
37,569 + -1.9
37,571 + 0.6
37,609 + -0.1
37,610 - -0.0
37,630 - 11923 mRNA_3555 0.12 0.5
37,630 + 11923 mRNA_3555 0.12 -1.1
37,632 + 11923 mRNA_3555 0.12 -1.2
37,636 + 11923 mRNA_3555 0.13 -0.4
37,646 + 11923 mRNA_3555 0.14 -2.1
37,650 - 11923 mRNA_3555 0.15 -0.2
37,684 - 11923 mRNA_3555 0.19 1.2
37,746 + 11923 mRNA_3555 0.27 -1.8
37,753 + 11923 mRNA_3555 0.28 -1.1
37,760 + 11923 mRNA_3555 0.29 -0.7
37,763 + 11923 mRNA_3555 0.29 0.1
37,812 - 11923 mRNA_3555 0.36 0.2
37,822 - 11923 mRNA_3555 0.37 -3.5
37,833 + 11923 mRNA_3555 0.38 1.3
37,833 - 11923 mRNA_3555 0.38 1.1
37,835 + 11923 mRNA_3555 0.38 -0.6
37,844 - 11923 mRNA_3555 0.40 -0.1
37,848 - 11923 mRNA_3555 0.40 0.2
37,861 + 11923 mRNA_3555 0.42 -1.9
37,865 - 11923 mRNA_3555 0.42 -1.7
37,867 + 11923 mRNA_3555 0.43 0.1
37,870 + 11923 mRNA_3555 0.43 -0.8
37,871 + 11923 mRNA_3555 0.43 -1.7
37,877 + 11923 mRNA_3555 0.44 0.8
37,885 - 11923 mRNA_3555 0.45 1.6
37,920 + 11923 mRNA_3555 0.49 -0.1
37,920 + 11923 mRNA_3555 0.49 -0.3
37,924 + 11923 mRNA_3555 0.50 -0.8
37,931 + 11923 mRNA_3555 0.51 0.2
37,979 + 11923 mRNA_3555 0.57 -1.4
37,984 + 11923 mRNA_3555 0.58 -1.0
37,994 + 11923 mRNA_3555 0.59 -1.3
38,032 + 11923 mRNA_3555 0.64 -0.6
38,081 - 11923 mRNA_3555 0.70 -1.6
38,081 - 11923 mRNA_3555 0.70 -2.6
38,084 - 11923 mRNA_3555 0.71 0.3
38,086 + 11923 mRNA_3555 0.71 -1.6
38,090 + 11923 mRNA_3555 0.71 -2.5
38,115 + 11923 mRNA_3555 0.75 -1.6
38,128 + 11923 mRNA_3555 0.76 -0.5
38,163 - 11923 mRNA_3555 0.81 3.0
38,183 + 11923 mRNA_3555 0.83 -0.2
38,193 + 11923 mRNA_3555 0.85 1.0
38,234 + 11923 mRNA_3555 0.90 2.9
38,253 - 2.9
38,254 - 2.2
38,256 - 0.0
38,257 + -1.0
38,258 - 1.9
38,258 - 2.0
38,269 + 1.9
38,272 + 0.7
38,275 + 1.5
38,285 + 2.1
38,411 + 2.2
38,421 - -1.1
38,431 - 1.5
38,476 + 2.5
38,548 + 2.2
38,580 + 2.6
38,612 + 1.4
38,706 - 11924 mRNA_3556 0.11 1.9
38,767 + 11924 mRNA_3556 0.14 2.3
38,904 + 11924 mRNA_3556 0.19 2.9
39,199 - 11924 mRNA_3556 0.32 2.3
39,206 + 11924 mRNA_3556 0.32 3.7
39,447 - 11924 mRNA_3556 0.42 2.5
39,471 - 11924 mRNA_3556 0.43 2.4
39,481 + 11924 mRNA_3556 0.44 1.7
39,517 + 11924 mRNA_3556 0.45 2.6
39,760 + 11924 mRNA_3556 0.55 2.5
39,781 - 11924 mRNA_3556 0.56 1.9
39,865 - 11924 mRNA_3556 0.60 3.1
40,205 - 11924 mRNA_3556 0.74 0.9
40,298 + 11924 mRNA_3556 0.78 2.0
40,353 + 11924 mRNA_3556 0.80 -0.2
40,357 + 11924 mRNA_3556 0.81 0.5
40,402 - 11924 mRNA_3556 0.82 1.5
40,937 + 0.2
40,974 + 0.6
41,079 - -0.7
41,080 - -0.0
41,082 - 1.0
41,084 + -1.5
41,224 + -1.0
41,226 - -0.3
41,227 + -0.2
41,234 + -0.4
41,242 + 0.6
41,261 - -0.3
41,369 - 0.3
41,371 - -0.0
41,391 - 0.4
41,396 + -0.8
41,405 + 0.3
41,564 - 0.2
41,678 - -2.6
41,692 - 11925 mRNA_3557 0.10 -1.2
41,692 + 11925 mRNA_3557 0.10 -0.0