Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3511

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3511: 11879 - K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein, at 270571 to 274030 11879 mRNA_3512: 11880 - K10873 RAD52 DNA repair and recombination protein RAD52, at 274074 to 276108 11880

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
269,714 + -1.8
269,996 - -0.0
270,157 + 0.1
270,157 - -0.7
270,281 - -0.9
270,287 + 0.3
270,296 - -0.4
270,296 + -0.3
270,436 - 1.2
270,460 + -2.2
270,786 + -2.3
271,162 - 11879 mRNA_3511 0.17 1.1
271,351 - 11879 mRNA_3511 0.23 -0.0
273,945 + -2.8
274,402 + 11880 mRNA_3512 0.16 0.3
274,438 + 11880 mRNA_3512 0.18 -0.5
274,546 - 11880 mRNA_3512 0.23 -0.1
274,660 + 11880 mRNA_3512 0.29 -0.2
274,660 - 11880 mRNA_3512 0.29 0.9
274,697 + 11880 mRNA_3512 0.31 -1.4
274,699 - 11880 mRNA_3512 0.31 -0.3
274,706 - 11880 mRNA_3512 0.31 0.9
274,827 - 11880 mRNA_3512 0.37 -0.7
274,827 - 11880 mRNA_3512 0.37 -0.7
274,854 + 11880 mRNA_3512 0.38 -2.0