Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3472

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3471: 11839 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2 Transcription-silencing protein Clr2, at 181846 to 184835 11839 mRNA_3472: 11840 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 185364 to 186603 11840 mRNA_3473: 11841 - K11578 ZW10, DSL1 protein transport protein DSL1/ZW10, at 186960 to 196280 11841

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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184,391 - 11839 mRNA_3471 0.85 -0.1
184,488 + 11839 mRNA_3471 0.88 -3.6
184,662 + 0.8
184,825 + -0.6
184,964 + -2.3
185,262 - 0.2
185,542 + 11840 mRNA_3472 0.14 0.2
185,573 + 11840 mRNA_3472 0.17 -0.9
185,689 + 11840 mRNA_3472 0.26 1.0
185,693 - 11840 mRNA_3472 0.27 -1.1
185,829 + 11840 mRNA_3472 0.38 0.5
186,432 - 11840 mRNA_3472 0.86 -0.0
186,527 - -0.8
186,561 - 1.5
186,571 + 0.4
186,575 - -0.3
186,578 + -0.3
186,581 - -0.7
186,587 + -1.2
186,710 + -1.9
186,735 - -2.5