Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3410

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20794 to 26649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27190 to 28187 11778

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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26,269 + -1.6
26,289 + 0.2
26,293 + -2.1
26,306 + 0.1
26,435 - -2.3
26,460 + -1.0
26,543 + -3.1
26,559 - -0.8
26,572 + -0.9
26,589 - -1.2
26,590 + -1.3
26,596 + -0.2
26,602 + -0.9
26,621 - -0.2
26,640 - -2.5
26,645 + 0.3
26,647 - -1.9
26,654 + -1.8
26,654 - 0.4
26,666 - -0.8
26,915 + 0.5
26,941 - -0.6
26,942 - -0.3
26,947 + -0.5
26,957 + 1.5
27,048 + -0.1
27,130 + -0.1
27,371 + 11778 mRNA_3410 0.18 -2.9
27,378 + 11778 mRNA_3410 0.19 -1.4
27,394 - 11778 mRNA_3410 0.20 2.0
27,403 + 11778 mRNA_3410 0.21 1.2
27,518 - 11778 mRNA_3410 0.33 0.7
27,574 - 11778 mRNA_3410 0.38 -2.6
28,109 + 0.3
28,416 + 0.1
28,491 - 0.3
28,493 + 0.1
28,718 + 0.4
28,730 + -0.9
28,738 + -0.3
28,753 - -0.4
28,771 + 0.3
28,771 + -0.2
28,786 - -1.2
28,787 + -1.5
28,789 + -0.7
28,798 + 0.4
28,813 - -0.0
28,832 + 0.4