Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3407

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3406: 11774 - Hypothetical Protein, at 12464 to 13384 11774 mRNA_3407: 11775 - KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain, at 13609 to 17494 11775 mRNA_3408: 11776 - K00012 UGDH, ugd UDPglucose 6-dehydrogenase, at 18200 to 20454 11776

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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12,648 + 11774 mRNA_3406 0.20 -2.0
12,661 + 11774 mRNA_3406 0.21 -0.0
12,772 - 11774 mRNA_3406 0.33 0.4
12,778 + 11774 mRNA_3406 0.34 0.3
12,779 - 11774 mRNA_3406 0.34 0.5
12,799 + 11774 mRNA_3406 0.36 1.1
12,803 - 11774 mRNA_3406 0.37 -2.7
12,805 - 11774 mRNA_3406 0.37 -1.7
12,817 - 11774 mRNA_3406 0.38 -0.1
12,821 + 11774 mRNA_3406 0.39 -0.7
12,821 - 11774 mRNA_3406 0.39 -0.9
12,827 + 11774 mRNA_3406 0.39 1.1
12,936 - 11774 mRNA_3406 0.51 0.3
12,936 - 11774 mRNA_3406 0.51 -0.3
12,949 + 11774 mRNA_3406 0.53 -0.7
12,957 + 11774 mRNA_3406 0.54 -0.7
12,964 - 11774 mRNA_3406 0.54 0.2
12,964 + 11774 mRNA_3406 0.54 -0.6
12,971 - 11774 mRNA_3406 0.55 -0.4
12,973 - 11774 mRNA_3406 0.55 0.2
12,976 - 11774 mRNA_3406 0.56 0.1
13,100 - 11774 mRNA_3406 0.69 0.6
13,114 - 11774 mRNA_3406 0.71 0.2
13,119 - 11774 mRNA_3406 0.71 -1.2
13,122 - 11774 mRNA_3406 0.71 0.3
13,130 + 11774 mRNA_3406 0.72 0.6
13,136 - 11774 mRNA_3406 0.73 -1.0
13,225 - 11774 mRNA_3406 0.83 -1.1
13,242 - 11774 mRNA_3406 0.84 -0.6
13,273 + 11774 mRNA_3406 0.88 0.9
13,286 - 11774 mRNA_3406 0.89 -1.0
13,300 + 0.9
13,318 - 0.4
13,343 + -0.1
13,348 - -0.6
13,348 - -0.5
13,381 - -1.5
13,386 + -0.2
13,389 - -2.3
13,399 - 0.1
13,401 - 0.8
13,415 - -0.4
13,415 + 0.9
13,418 + -0.1
13,427 + 1.6
13,445 - -1.5
13,455 - -0.1
13,466 - 0.3
13,536 - -0.4
13,583 - 1.2
13,750 + -0.4
14,003 - 11775 mRNA_3407 0.10 -0.4
14,040 - 11775 mRNA_3407 0.11 -0.2
14,396 - 11775 mRNA_3407 0.20 -0.7
14,398 - 11775 mRNA_3407 0.20 -0.7
14,431 + 11775 mRNA_3407 0.21 -0.3
14,454 - 11775 mRNA_3407 0.22 0.7
14,642 - 11775 mRNA_3407 0.27 -0.6
14,877 - 11775 mRNA_3407 0.33 0.2
15,021 - 11775 mRNA_3407 0.36 0.0
15,311 - 11775 mRNA_3407 0.44 -1.8
15,728 - 11775 mRNA_3407 0.55 -1.7
15,743 + 11775 mRNA_3407 0.55 -2.3
15,913 - 11775 mRNA_3407 0.59 -2.1
15,923 - 11775 mRNA_3407 0.60 0.2
16,447 - 11775 mRNA_3407 0.73 -0.3
17,077 + 11775 mRNA_3407 0.89 0.3
17,661 - -1.1
17,687 + 0.0
17,824 + 0.2
17,911 - 0.3
17,919 - 0.0
17,920 - 2.6
17,937 + 2.5
17,938 - -0.8
17,964 - -0.2
17,987 - -1.4
18,054 - -0.9
18,069 + -1.3
18,097 - 1.7
18,099 + -0.9
18,109 - -0.9
18,119 - -0.7
18,121 - -0.3
18,123 - -3.7
18,126 + 0.3
18,127 - -0.1
18,128 + 0.4
18,131 - -0.5
18,267 - -3.4
18,271 - -0.3
18,398 + 1.1