Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3385

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3385: 11753 - HMMPfam-Gamma interferon inducible lysosomal thiol reductase (GILT)-PF03227, at 554455 to 555770 11753 mRNA_3386: 11754 - K05756 ARPC3 actin related protein 2/3 complex, subunit 3, at 556119 to 557419 11754

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
553,560 + 0.4
554,046 + 0.0
554,060 + -0.6
554,186 + 0.5
554,333 + 0.7
554,339 - -0.3
554,345 - -1.8
554,345 + -0.7
554,346 + 1.1
554,347 + -1.1
554,351 - -0.2
554,361 + 0.2
554,362 + -1.0
554,369 - -1.6
554,389 - 0.5
554,390 + -2.0
554,400 - -0.6
554,632 - 11753 mRNA_3385 0.13 0.4
554,644 + 11753 mRNA_3385 0.14 0.2
554,673 - 11753 mRNA_3385 0.17 -0.4
554,789 - 11753 mRNA_3385 0.25 0.9
554,793 - 11753 mRNA_3385 0.26 -1.4
554,938 + 11753 mRNA_3385 0.37 0.8
554,941 - 11753 mRNA_3385 0.37 0.2
555,086 + 11753 mRNA_3385 0.48 -0.2
555,302 - 11753 mRNA_3385 0.64 -1.5
555,385 + 11753 mRNA_3385 0.71 0.5
555,632 + 11753 mRNA_3385 0.89 0.9
555,812 + -0.0
555,813 - -1.5
555,958 - -0.3
555,965 + -2.1
555,967 + -0.7
555,975 + 1.0
555,976 - 0.9
555,989 + -2.5
556,011 - 0.3