Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3343

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3343: 11711 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 433717 to 434732 11711 mRNA_3344: 11712 - Hypothetical Protein, at 435281 to 435909 11712

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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433,336 + -0.7
433,522 - -1.0
433,621 + 0.5
433,692 + 0.2
433,746 - 1.7
433,777 + -0.1
434,047 - 11711 mRNA_3343 0.32 0.1
434,344 - 11711 mRNA_3343 0.62 1.2
434,349 - 11711 mRNA_3343 0.62 -1.2
434,435 + 11711 mRNA_3343 0.71 -0.9
434,470 - 11711 mRNA_3343 0.74 -0.6
434,627 + 11711 mRNA_3343 0.90 -0.2
434,627 + 11711 mRNA_3343 0.90 -0.2
434,637 + -1.7
434,637 + -1.5
434,642 - 1.0
434,653 + 0.1
434,758 - 1.4
434,771 - 3.7
434,771 - -0.6
434,780 - -0.7
434,788 - -0.2
434,788 + 0.2
434,793 - -1.7
434,793 - 0.8
434,794 - 0.2
434,795 - -1.3
434,797 - -0.5
434,798 - 0.1
434,801 + -0.1
434,806 - -0.6
434,806 - -0.9
434,808 - -1.3
434,810 + 0.8
434,810 - 0.6
434,810 - -1.6
434,811 - -1.1
434,811 - 0.2
434,811 - 0.5
434,814 + -0.2
434,818 - -1.3
434,818 + 0.3
434,820 - 0.1
434,825 + -1.2
434,826 + -0.2
434,835 - -0.7
434,836 + -2.1
434,838 + -0.1
434,839 - -1.1
434,846 + -0.2
434,847 + -1.4
434,851 + -0.8
434,859 + -1.7
434,861 + 0.4
434,862 - -1.2
434,864 + -0.9
434,864 + -1.0
434,901 - -1.8
434,915 - -1.0
434,932 - 1.9
434,933 + 0.3
434,936 + 0.5
434,965 - 1.2
434,968 - 0.2
434,972 - 0.0
434,980 + 2.3
434,982 + 0.8
434,985 - -0.7
434,989 + 0.7
434,994 - 1.4
435,007 - -0.2
435,007 + -0.2
435,008 - 0.5
435,009 + 0.7
435,009 - -0.0
435,014 - 2.1
435,017 - -2.1
435,021 - -1.3
435,022 + -0.1
435,022 + 0.0
435,022 + -1.0
435,022 + -0.9
435,031 - -0.1
435,037 + -0.2
435,039 - -1.8
435,041 - -1.6
435,043 + -0.4
435,044 + 0.7
435,055 + -0.2
435,056 - -0.0
435,057 + 0.1
435,062 - 0.0
435,062 - 0.3
435,067 - -0.1
435,068 - -1.6
435,072 - 0.3
435,077 - -0.5
435,084 - 0.1
435,089 + 0.9
435,092 - 1.0
435,101 + 1.6
435,105 + 0.7
435,184 + 1.3
435,188 - -0.3
435,214 + -0.0
435,218 + -2.7
435,242 + -0.5
435,254 - 0.4
435,270 + 0.9
435,366 - 11712 mRNA_3344 0.14 -1.8
435,367 + 11712 mRNA_3344 0.14 0.6
435,386 - 11712 mRNA_3344 0.17 1.4
435,413 + 11712 mRNA_3344 0.21 0.5
435,415 - 11712 mRNA_3344 0.21 0.5
435,425 + 11712 mRNA_3344 0.23 0.8
435,444 + 11712 mRNA_3344 0.26 0.5
435,480 - 11712 mRNA_3344 0.32 0.1
435,551 - 11712 mRNA_3344 0.43 -0.8
435,558 + 11712 mRNA_3344 0.44 0.0
435,687 + 11712 mRNA_3344 0.65 0.3
435,708 - 11712 mRNA_3344 0.68 -0.6