Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3239

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3238: 11606 - BLAST RNA replication protein [Rhizoctonia solani], at 184726 to 188428 11606 mRNA_3239: 11607 - K15425 PPP4R2 serine/threonine-protein phosphatase 4 regulatory subunit 2, at 188570 to 189872 11607

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
187,714 + 11606 mRNA_3238 0.81 0.4
187,717 - 11606 mRNA_3238 0.81 -0.3
187,720 + 11606 mRNA_3238 0.81 0.3
188,288 + 0.1
188,346 + -1.9
188,674 + 0.2
188,680 - 0.6
188,738 - 11607 mRNA_3239 0.13 -1.0
188,782 + 11607 mRNA_3239 0.16 0.2
188,789 + 11607 mRNA_3239 0.17 0.6
188,792 - 11607 mRNA_3239 0.17 0.7
188,985 + 11607 mRNA_3239 0.32 -0.9
189,049 - 11607 mRNA_3239 0.37 1.2
189,207 - 11607 mRNA_3239 0.49 -0.8
189,221 - 11607 mRNA_3239 0.50 2.1
189,348 + 11607 mRNA_3239 0.60 2.4
189,385 - 11607 mRNA_3239 0.63 2.3
189,537 - 11607 mRNA_3239 0.74 0.4
189,663 - 11607 mRNA_3239 0.84 2.1
189,800 + 1.8
189,862 - 0.6
189,953 - 1.0
190,061 + 0.7
190,075 + 0.3
190,081 + -2.1
190,236 - -0.3
190,244 + -0.3
190,248 - 1.2
190,265 + -0.4
190,433 - 0.3
190,548 - -2.7
190,596 + 0.8