Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3153

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438780 to 439151 11520 mRNA_3153: 11521 - BLAST serine proline rich protein [Moniliophthora rorer..., at 439382 to 440661 11521 mRNA_3154: 11522 - K14831 MAK16 protein MAK16, at 440957 to 442475 11522

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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438,414 - 0.7
438,426 - -1.7
438,436 - -0.3
438,446 + 0.6
438,469 - 1.1
438,471 - -0.4
438,472 + -2.1
438,478 - 0.1
438,503 + -1.5
438,542 - 1.4
438,552 + -0.4
438,560 - -1.7
438,603 - -1.5
438,612 - 0.7
438,614 - 0.2
438,629 + 1.3
438,643 + -1.1
438,645 + -0.3
438,655 - 0.0
438,662 - -1.6
438,778 - -0.2
438,784 + 0.5
438,844 - 11520 mRNA_3152 0.17 -2.1
438,898 + 11520 mRNA_3152 0.32 0.2
438,920 + 11520 mRNA_3152 0.38 0.2
438,952 - 11520 mRNA_3152 0.46 -0.5
439,046 - 11520 mRNA_3152 0.72 -1.3
439,067 - 11520 mRNA_3152 0.77 -0.5
439,080 + 11520 mRNA_3152 0.81 -0.0
439,089 + 11520 mRNA_3152 0.83 0.9
439,199 - 0.8
439,200 + 3.7
439,201 - 0.7
439,202 + -0.2
439,203 - 0.3
439,203 + -1.3
439,204 + -0.8
439,344 - -1.0
439,350 + -0.3
439,485 + -1.8
439,645 + 11521 mRNA_3153 0.21 -0.3
439,674 + 11521 mRNA_3153 0.23 -0.5
439,785 - 11521 mRNA_3153 0.31 -0.4
439,787 + 11521 mRNA_3153 0.32 1.0
439,792 - 11521 mRNA_3153 0.32 0.8
440,096 + 11521 mRNA_3153 0.56 -2.5
440,332 - 11521 mRNA_3153 0.74 -1.0
440,340 + 11521 mRNA_3153 0.75 -0.3
440,495 - 11521 mRNA_3153 0.87 -1.1
440,508 + 11521 mRNA_3153 0.88 -0.6
440,639 - 1.0
440,692 + -0.9
440,928 - -0.5
440,945 - 0.5
440,973 - -1.2
441,230 - 11522 mRNA_3154 0.18 -4.6
441,364 + 11522 mRNA_3154 0.27 1.8
441,385 + 11522 mRNA_3154 0.28 0.8
441,487 - 11522 mRNA_3154 0.35 -0.4
441,546 - 11522 mRNA_3154 0.39 -0.8