Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3151

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3150: 11518 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 435030 to 436321 11518 mRNA_3151: 11519 - Hypothetical Protein, at 436481 to 438109 11519 mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438780 to 439151 11520

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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435,484 + 11518 mRNA_3150 0.35 -1.3
435,485 + 11518 mRNA_3150 0.35 0.3
435,564 - 11518 mRNA_3150 0.41 -0.1
435,571 + 11518 mRNA_3150 0.42 0.9
435,684 - 11518 mRNA_3150 0.51 -0.1
435,702 + 11518 mRNA_3150 0.52 -1.7
435,718 - 11518 mRNA_3150 0.53 -0.8
435,843 - 11518 mRNA_3150 0.63 0.2
435,865 + 11518 mRNA_3150 0.65 -0.9
435,979 - 11518 mRNA_3150 0.73 0.3
436,001 - 11518 mRNA_3150 0.75 -1.2
436,102 - 11518 mRNA_3150 0.83 -0.7
436,241 + -1.6
436,445 + 0.4
436,643 + -1.4
436,712 - 11519 mRNA_3151 0.14 -1.5
436,734 - 11519 mRNA_3151 0.16 0.3
436,799 + 11519 mRNA_3151 0.20 0.5
436,895 + 11519 mRNA_3151 0.25 1.6
436,901 + 11519 mRNA_3151 0.26 0.7
437,009 - 11519 mRNA_3151 0.32 0.6
437,041 + 11519 mRNA_3151 0.34 1.4
437,214 - 11519 mRNA_3151 0.45 1.0
437,264 + 11519 mRNA_3151 0.48 -3.0
437,296 + 11519 mRNA_3151 0.50 0.1
437,300 + 11519 mRNA_3151 0.50 0.0
437,300 - 11519 mRNA_3151 0.50 0.1
437,303 - 11519 mRNA_3151 0.50 -0.4
437,315 - 11519 mRNA_3151 0.51 0.2
437,328 - 11519 mRNA_3151 0.52 -1.2
437,329 + 11519 mRNA_3151 0.52 -0.5
437,445 - 11519 mRNA_3151 0.59 -1.1
437,445 - 11519 mRNA_3151 0.59 0.3
437,488 - 11519 mRNA_3151 0.62 0.3
437,491 + 11519 mRNA_3151 0.62 -1.6
437,493 - 11519 mRNA_3151 0.62 -0.6
437,504 + 11519 mRNA_3151 0.63 -0.3
437,524 - 11519 mRNA_3151 0.64 1.3
437,547 - 11519 mRNA_3151 0.65 0.6
437,639 + 11519 mRNA_3151 0.71 1.4
437,650 + 11519 mRNA_3151 0.72 -2.9
437,673 - 11519 mRNA_3151 0.73 -1.4
437,673 + 11519 mRNA_3151 0.73 -1.0
437,682 - 11519 mRNA_3151 0.74 -0.2
437,694 + 11519 mRNA_3151 0.74 -0.3
437,717 + 11519 mRNA_3151 0.76 0.0
437,736 - 11519 mRNA_3151 0.77 -0.6
437,763 + 11519 mRNA_3151 0.79 0.4
437,781 + 11519 mRNA_3151 0.80 -0.4
437,786 - 11519 mRNA_3151 0.80 0.2
437,793 + 11519 mRNA_3151 0.81 0.0
437,803 - 11519 mRNA_3151 0.81 -0.3
437,811 + 11519 mRNA_3151 0.82 0.3
437,818 - 11519 mRNA_3151 0.82 -1.3
437,818 - 11519 mRNA_3151 0.82 -0.7
437,819 + 11519 mRNA_3151 0.82 2.5
437,820 - 11519 mRNA_3151 0.82 -1.0
437,825 - 11519 mRNA_3151 0.83 -0.4
437,826 - 11519 mRNA_3151 0.83 1.3
437,828 - 11519 mRNA_3151 0.83 0.7
437,828 - 11519 mRNA_3151 0.83 -1.7
437,830 - 11519 mRNA_3151 0.83 -1.6
437,832 + 11519 mRNA_3151 0.83 0.2
437,833 - 11519 mRNA_3151 0.83 -1.6
437,835 - 11519 mRNA_3151 0.83 -1.7
437,836 - 11519 mRNA_3151 0.83 -1.9
437,836 + 11519 mRNA_3151 0.83 0.6
437,836 + 11519 mRNA_3151 0.83 1.8
437,839 - 11519 mRNA_3151 0.83 -0.4
437,840 - 11519 mRNA_3151 0.83 -1.6
437,840 - 11519 mRNA_3151 0.83 -0.6
437,842 - 11519 mRNA_3151 0.84 -1.2
437,843 + 11519 mRNA_3151 0.84 -2.9
437,844 - 11519 mRNA_3151 0.84 -1.5
437,845 + 11519 mRNA_3151 0.84 -0.7
437,846 - 11519 mRNA_3151 0.84 0.2
437,847 + 11519 mRNA_3151 0.84 -0.3
437,847 + 11519 mRNA_3151 0.84 0.4
437,847 + 11519 mRNA_3151 0.84 -1.3
437,847 + 11519 mRNA_3151 0.84 -0.6
437,848 + 11519 mRNA_3151 0.84 0.5
437,850 - 11519 mRNA_3151 0.84 -0.2
437,850 + 11519 mRNA_3151 0.84 -0.7
437,851 + 11519 mRNA_3151 0.84 -0.3
437,851 + 11519 mRNA_3151 0.84 0.1
437,852 + 11519 mRNA_3151 0.84 -3.2
437,853 + 11519 mRNA_3151 0.84 -1.7
437,853 + 11519 mRNA_3151 0.84 0.3
437,853 - 11519 mRNA_3151 0.84 0.0
437,854 - 11519 mRNA_3151 0.84 -0.3
437,855 + 11519 mRNA_3151 0.84 -0.0
437,855 + 11519 mRNA_3151 0.84 -0.3
437,856 + 11519 mRNA_3151 0.84 -0.2
437,857 + 11519 mRNA_3151 0.84 -0.7
437,862 - 11519 mRNA_3151 0.85 0.2
437,866 + 11519 mRNA_3151 0.85 0.7
437,867 + 11519 mRNA_3151 0.85 -2.5
437,867 + 11519 mRNA_3151 0.85 -1.1
437,868 - 11519 mRNA_3151 0.85 1.3
437,870 + 11519 mRNA_3151 0.85 -1.0
437,870 - 11519 mRNA_3151 0.85 -1.3
437,870 + 11519 mRNA_3151 0.85 -2.1
437,872 + 11519 mRNA_3151 0.85 -0.0
437,873 - 11519 mRNA_3151 0.85 -1.2
437,873 + 11519 mRNA_3151 0.85 0.8
437,874 + 11519 mRNA_3151 0.86 -1.9
437,874 + 11519 mRNA_3151 0.86 -0.1
437,884 + 11519 mRNA_3151 0.86 -0.5
437,897 + 11519 mRNA_3151 0.87 -1.3
437,905 - 11519 mRNA_3151 0.87 -0.5
437,914 - 11519 mRNA_3151 0.88 -0.0
437,920 + 11519 mRNA_3151 0.88 0.3
437,924 - 11519 mRNA_3151 0.89 -0.7
437,927 - 11519 mRNA_3151 0.89 0.6
437,927 + 11519 mRNA_3151 0.89 -1.0
437,936 + 11519 mRNA_3151 0.89 -0.0
437,936 - 11519 mRNA_3151 0.89 1.7
437,940 + 11519 mRNA_3151 0.90 0.8
437,951 - -1.6
437,958 + 0.0
437,996 + -1.8
438,035 - -0.9
438,041 - 0.3
438,047 - -0.9
438,050 + -1.0
438,051 - 1.2
438,053 + -0.5
438,058 - -1.9
438,058 - -1.5
438,059 - -1.5
438,061 - -0.0
438,061 + 1.3
438,061 + -0.1
438,062 + -1.5
438,064 + -0.9
438,066 - -2.4
438,067 - -1.1
438,067 - -1.7
438,069 - -0.1
438,070 - -1.3
438,070 + 1.3
438,070 - -1.6
438,072 - -1.7
438,076 + 0.5
438,077 + -1.0
438,077 + -0.4
438,080 - -2.3
438,080 + 0.7
438,082 - -0.9
438,083 + 0.2
438,085 + -1.3
438,089 - -1.4
438,089 + 0.0
438,090 - 1.2
438,091 - 0.1
438,094 + 0.2
438,098 + 0.8
438,106 + 1.1
438,107 + -3.1
438,112 + 1.0
438,112 + -0.7
438,124 + 0.4
438,131 - -0.9
438,142 - 0.1
438,148 - -0.2
438,150 - -1.0
438,161 + -0.7
438,168 - 0.6
438,180 - -0.1
438,180 + -1.2
438,181 + 1.0
438,193 + 0.1
438,195 - 0.4
438,208 - 0.8
438,208 + 0.4
438,227 + 1.4
438,231 - 0.1
438,233 - 0.1
438,234 - -2.0
438,236 + 0.6
438,237 - 0.2
438,239 + -0.2
438,242 + -0.3
438,242 + -1.6
438,252 - -1.9
438,253 - 0.3
438,257 - -1.9
438,257 - 0.6
438,259 + -0.4
438,259 + -1.3
438,263 - 0.1
438,264 + 1.7
438,266 - -1.9
438,282 + -1.5
438,283 - 0.2
438,287 - -0.7
438,294 - -0.7
438,303 - 1.4
438,306 + 0.5
438,316 - 1.0
438,319 + 1.3
438,320 - -0.5
438,326 + -1.2
438,330 - 0.2
438,341 + -0.9
438,344 - -0.5
438,346 - -0.0
438,347 - -0.6
438,361 - -0.5
438,368 + 0.2
438,380 - -0.9
438,414 - 0.7
438,426 - -1.7
438,436 - -0.3
438,446 + 0.6
438,469 - 1.1
438,471 - -0.4
438,472 + -2.1
438,478 - 0.1
438,503 + -1.5
438,542 - 1.4
438,552 + -0.4
438,560 - -1.7
438,603 - -1.5
438,612 - 0.7
438,614 - 0.2
438,629 + 1.3
438,643 + -1.1
438,645 + -0.3
438,655 - 0.0
438,662 - -1.6
438,778 - -0.2
438,784 + 0.5
438,844 - 11520 mRNA_3152 0.17 -2.1
438,898 + 11520 mRNA_3152 0.32 0.2
438,920 + 11520 mRNA_3152 0.38 0.2
438,952 - 11520 mRNA_3152 0.46 -0.5
439,046 - 11520 mRNA_3152 0.72 -1.3
439,067 - 11520 mRNA_3152 0.77 -0.5
439,080 + 11520 mRNA_3152 0.81 -0.0
439,089 + 11520 mRNA_3152 0.83 0.9