Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3105

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3105: 11473 - KOG1515 Arylacetamide deacetylase, at 334494 to 336059 11473 mRNA_3106: 11474 - BLAST potential peroxisomal matrix Pex8 protein [Pseudo..., at 336211 to 338758 11474

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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333,499 - 0.0
333,500 + 0.4
333,501 + 0.5
333,501 + -0.3
333,502 + 1.8
333,514 + 0.3
333,516 - 1.7
333,518 - -3.0
333,519 + -2.0
333,520 + -0.6
333,523 - -1.0
333,523 + -0.9
333,532 - 0.6
333,537 + -0.7
333,554 - -0.0
333,582 + 0.3
333,646 - -2.2
333,648 - 1.4
333,653 + -0.8
333,657 + 0.5
333,657 + -1.2
333,662 + 0.2
333,663 - -0.3
333,663 - 0.1
333,664 - -0.1
333,664 + -1.5
333,665 + -0.6
333,666 - -2.5
333,667 - -0.4
333,674 - 0.5
333,675 - 0.7
333,676 - 0.8
333,676 + -0.8
333,676 + 1.7
333,681 - 0.4
333,705 + 1.1
333,706 - 0.2
333,706 - -0.7
333,706 - -0.6
333,706 - 0.9
333,707 - 1.1
333,708 - -0.1
333,708 - 0.5
333,708 - -2.3
333,718 + 0.9
333,718 - 0.2
333,720 - 0.4
333,729 - -0.3
333,730 - 2.3
333,733 - -1.1
333,735 + -1.0
333,749 + -1.5
333,754 - -0.2
333,767 - -3.4
333,768 + -0.2
333,783 + 1.0
333,788 + -1.4
333,798 + -0.0
333,843 + 0.8
333,889 - -0.0
333,889 - -0.2
333,905 - 0.1
333,905 - 2.1
333,906 + 0.2
333,910 - -2.2
333,914 - -0.7
333,915 + 0.0
333,920 + -0.3
333,923 + 0.5
333,925 - -1.9
333,929 + 0.2
333,968 + 0.1
334,021 + -0.5
334,045 - 0.2
334,073 + -0.2
334,086 - -0.1
334,088 + -1.9
334,089 + -0.1
334,107 + 0.1
334,117 + -0.9
334,195 - -0.8
334,207 - 0.1
334,214 - 0.5
334,214 - 0.0
334,217 - 0.4
334,225 + -0.1
334,227 + -0.4
334,228 + 0.2
334,234 - 0.2
334,246 - -1.7
334,248 - 0.9
334,249 + 0.8
334,253 - 0.9
334,259 + 0.8
334,380 + 1.1
334,392 - -0.3
334,427 + 0.3
334,519 - -1.4
334,521 - 0.4
334,523 - -0.6
334,526 + 0.3
334,552 + 1.0
334,555 + 0.0
334,835 + 11473 mRNA_3105 0.22 2.8
334,970 + 11473 mRNA_3105 0.30 -0.6
334,970 - 11473 mRNA_3105 0.30 -1.1
334,983 - 11473 mRNA_3105 0.31 -0.5
335,142 - 11473 mRNA_3105 0.41 -0.9
335,163 - 11473 mRNA_3105 0.43 0.6
335,744 + 11473 mRNA_3105 0.80 -0.4
335,862 - 11473 mRNA_3105 0.87 -0.6
336,033 + -0.6
336,033 - -1.5
336,034 - -0.7
336,036 + 0.4
336,061 - -3.8
336,077 + -0.3
336,140 - 0.2
336,147 - -0.6
336,159 - 0.3
336,161 - -0.0
336,170 - -1.2
336,173 + -0.7
336,175 - 1.5
336,178 + -3.1
336,187 - -0.6
336,190 + -0.4
336,198 + -1.7
336,205 - -0.5
336,205 + 1.3
336,312 - 0.5
336,323 + -0.7
336,327 + -0.7
336,329 + 0.0
336,341 - -1.2
336,345 + 0.7
336,457 - 1.2
336,459 + -0.1
336,481 - 11474 mRNA_3106 0.11 -1.9
336,485 + 11474 mRNA_3106 0.11 0.0
336,491 - 11474 mRNA_3106 0.11 0.8
336,634 - 11474 mRNA_3106 0.17 -0.3
336,639 + 11474 mRNA_3106 0.17 -0.0
336,648 - 11474 mRNA_3106 0.17 3.6
336,649 - 11474 mRNA_3106 0.17 -1.3
336,775 + 11474 mRNA_3106 0.22 -0.4
336,787 - 11474 mRNA_3106 0.23 0.6
336,935 + 11474 mRNA_3106 0.28 -1.5