Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3101

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3101: 11469 - K01490 AMPD AMP deaminase, at 321739 to 325524 11469 mRNA_3102: 11470 - BLAST mannoprotein [Rhizoctonia solani AG-1 IA], at 325747 to 328243 11470

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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320,883 - 0.5
320,888 + 0.8
321,003 + -1.4
321,170 + 0.1
321,199 + -1.0
321,208 + -1.0
321,210 + 0.3
321,210 + -0.1
321,220 + 0.1
321,262 - -1.9
321,265 - -1.9
321,270 - 0.6
321,270 - 0.2
321,274 + -2.2
321,275 + -1.0
321,279 + 2.5
321,338 + -0.9
321,484 + -0.4
321,492 + 2.2
321,762 - 1.0
321,792 + -0.4
321,921 - -1.3
321,923 + -1.8
321,932 + -0.6
322,391 - 11469 mRNA_3101 0.17 1.9
322,396 - 11469 mRNA_3101 0.17 0.2
322,516 - 11469 mRNA_3101 0.21 -0.9
322,517 + 11469 mRNA_3101 0.21 1.8
322,656 + 11469 mRNA_3101 0.24 -1.8
322,847 + 11469 mRNA_3101 0.29 -2.1
322,865 - 11469 mRNA_3101 0.30 -1.5
323,103 + 11469 mRNA_3101 0.36 -1.9
323,365 + 11469 mRNA_3101 0.43 -0.6
323,668 - 11469 mRNA_3101 0.51 0.1
323,936 + 11469 mRNA_3101 0.58 -0.5
324,112 - 11469 mRNA_3101 0.63 -0.8
324,135 + 11469 mRNA_3101 0.63 -0.2
324,393 + 11469 mRNA_3101 0.70 -0.1
324,516 - 11469 mRNA_3101 0.73 0.6
324,550 - 11469 mRNA_3101 0.74 -0.1
324,799 - 11469 mRNA_3101 0.81 0.2
324,964 - 11469 mRNA_3101 0.85 0.5
324,971 + 11469 mRNA_3101 0.85 -0.3
325,072 + 11469 mRNA_3101 0.88 0.4
325,117 + 11469 mRNA_3101 0.89 -0.4
325,139 + 11469 mRNA_3101 0.90 0.9
325,143 + 11469 mRNA_3101 0.90 0.2
325,252 - 0.1
325,291 + 0.2
325,413 - 0.3
325,413 - 1.1
325,421 - -0.9
325,435 + -1.6
325,445 - 0.8
325,534 - 0.2
325,557 + 0.7
325,558 - 0.5
325,559 - 0.4
325,561 - 1.9
325,562 - -0.1
325,568 - -1.5
325,568 - -1.6
325,572 + -2.3
325,575 - 0.2
325,577 - -4.0
325,579 - 1.1
325,581 - -0.9
325,595 - 1.5
325,595 - 0.7
325,595 - -0.1
325,596 + 0.8
325,601 + 0.3
325,603 - -1.2
325,722 + 1.0
325,735 - 0.3
325,750 - -0.8
325,762 - 1.4
325,763 - 2.8
325,763 - -1.6
325,763 - -0.3
325,763 - 0.9
325,763 - -0.6
325,763 - 0.7
325,764 - -0.6
325,768 + -1.1
325,768 - 1.4
325,769 - -2.2
325,770 + -0.3
325,771 + 0.6
325,772 + -0.3
325,772 - -0.2
325,775 + 0.2
325,777 + -0.4
325,786 - -1.0
325,795 + -0.8
325,804 - 0.7
325,823 + 1.0
325,871 + -0.3
325,874 - -0.3
325,891 + -0.7
325,894 - 0.9
325,902 + 2.1
325,903 - -0.3
325,904 + -0.2
325,906 - -0.5
325,909 + -0.8
325,918 - 1.7
325,918 - -0.6
325,921 - -0.2
325,922 + 0.5
325,922 + 0.4
325,923 - 0.0
325,924 + 0.7
325,928 + -0.3
325,929 + -0.7
325,930 - -0.7
325,932 - -1.2
325,935 - -1.0
325,936 + -3.5
325,944 + -0.3
325,946 - 0.2
325,950 + -1.5
325,952 + 0.7
325,953 - 1.6
325,957 - 0.7
326,077 - 11470 mRNA_3102 0.13 0.6
326,078 - 11470 mRNA_3102 0.13 -0.2
326,084 + 11470 mRNA_3102 0.13 0.3
326,089 - 11470 mRNA_3102 0.14 0.5
326,090 - 11470 mRNA_3102 0.14 -0.0
326,091 - 11470 mRNA_3102 0.14 -1.0
326,095 - 11470 mRNA_3102 0.14 -0.1
326,096 - 11470 mRNA_3102 0.14 -0.4
326,101 + 11470 mRNA_3102 0.14 0.6
326,101 + 11470 mRNA_3102 0.14 -0.6
326,117 + 11470 mRNA_3102 0.15 -1.0
326,122 + 11470 mRNA_3102 0.15 -1.0
326,221 + 11470 mRNA_3102 0.19 -1.7
326,223 - 11470 mRNA_3102 0.19 -0.2
326,226 - 11470 mRNA_3102 0.19 -1.7
326,235 - 11470 mRNA_3102 0.20 -0.8
326,249 + 11470 mRNA_3102 0.20 -2.0
326,251 - 11470 mRNA_3102 0.20 -0.1
326,263 + 11470 mRNA_3102 0.21 -0.9
326,270 + 11470 mRNA_3102 0.21 0.0
326,294 + 11470 mRNA_3102 0.22 0.4
326,306 + 11470 mRNA_3102 0.22 -0.4
326,405 + 11470 mRNA_3102 0.26 -0.4
326,417 - 11470 mRNA_3102 0.27 -1.0
326,498 + 11470 mRNA_3102 0.30 -0.8
326,513 + 11470 mRNA_3102 0.31 0.4