Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3095

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305611 to 307227 11462 mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307460 to 310020 11463 mRNA_3096: 11464 - K17262 TBCB, CKAP1, ALF1 tubulin-folding cofactor B, at 310272 to 311367 11464

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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306,724 + 11462 mRNA_3094 0.69 1.2
306,852 - 11462 mRNA_3094 0.77 1.8
306,857 - 11462 mRNA_3094 0.77 -2.3
306,973 - 11462 mRNA_3094 0.84 -2.2
307,007 - 11462 mRNA_3094 0.86 -0.5
307,139 - -0.5
307,145 + -0.2
307,151 + -0.2
307,152 - 0.7
307,259 - -0.5
307,268 - -1.2
307,269 + 1.7
307,271 + -0.4
307,273 - -0.5
307,273 - -1.3
307,274 + -1.8
307,278 + -0.9
307,281 + -0.9
307,284 - -0.0
307,288 + 0.3
307,290 + 0.2
307,294 + -2.7
307,294 + 0.1
307,294 - 0.5
307,297 + -0.7
307,297 - -0.2
307,300 + 0.9
307,302 + 0.2
307,303 - 0.7
307,304 + 0.7
307,305 + 0.0
307,305 + 0.8
307,308 - 0.5
307,312 - -2.3
307,326 + 0.2
307,332 + -0.3
307,333 + -1.0
307,336 - -0.0
307,344 + -0.2
307,353 + 0.3
307,408 + 0.0
307,449 + -1.3
307,475 - 1.5
307,621 - -0.5
307,728 - 11463 mRNA_3095 0.10 0.1
307,765 - 11463 mRNA_3095 0.12 0.3
307,774 + 11463 mRNA_3095 0.12 -0.7
307,776 + 11463 mRNA_3095 0.12 0.3
307,780 - 11463 mRNA_3095 0.12 0.9
307,781 + 11463 mRNA_3095 0.13 -0.4
307,902 - 11463 mRNA_3095 0.17 -0.3
308,226 - 11463 mRNA_3095 0.30 0.5
308,277 - 11463 mRNA_3095 0.32 1.2
308,610 - 11463 mRNA_3095 0.45 1.9
308,690 + 11463 mRNA_3095 0.48 1.2
308,754 - 11463 mRNA_3095 0.51 -1.8
308,754 - 11463 mRNA_3095 0.51 0.1
309,190 + 11463 mRNA_3095 0.68 -0.4
309,341 - 11463 mRNA_3095 0.73 -0.7
309,354 - 11463 mRNA_3095 0.74 -3.3
309,460 - 11463 mRNA_3095 0.78 -0.9
309,505 + 11463 mRNA_3095 0.80 -0.0
309,515 - 11463 mRNA_3095 0.80 0.0
309,591 - 11463 mRNA_3095 0.83 -0.9
309,647 + 11463 mRNA_3095 0.85 -0.8
309,662 - 11463 mRNA_3095 0.86 -1.3
309,768 + 1.6
309,777 - -1.2
309,782 - -0.3
309,796 - 0.9
309,800 - -0.6
309,936 + 0.1
309,968 + -0.6
309,970 + 1.7
309,984 + 0.0
310,058 + 0.3
310,075 + -1.4
310,081 + -1.3
310,084 - -1.6
310,087 + -0.2
310,096 - -1.3
310,097 + -0.6
310,105 + -0.5
310,107 + 0.3
310,108 - -0.8
310,113 - -0.9
310,122 - -0.8
310,123 + -0.2
310,155 - -0.4
310,249 - -2.1
310,255 + 1.6
310,264 - -1.0
310,272 - 0.2
310,276 + -0.3
310,293 + -0.0
310,375 + 1.7
310,387 + 11464 mRNA_3096 0.10 0.0
310,397 - 11464 mRNA_3096 0.11 0.1
310,397 - 11464 mRNA_3096 0.11 -1.1
310,399 - 11464 mRNA_3096 0.12 -0.2
310,403 + 11464 mRNA_3096 0.12 0.3
310,407 + 11464 mRNA_3096 0.12 -1.1
310,415 + 11464 mRNA_3096 0.13 0.0
310,423 + 11464 mRNA_3096 0.14 -0.6
310,509 - 11464 mRNA_3096 0.22 -1.4
310,520 + 11464 mRNA_3096 0.23 -0.3
310,531 - 11464 mRNA_3096 0.24 -0.9
310,550 - 11464 mRNA_3096 0.25 0.6
310,563 + 11464 mRNA_3096 0.27 -0.8
310,566 - 11464 mRNA_3096 0.27 1.0
310,571 - 11464 mRNA_3096 0.27 -0.3
310,692 + 11464 mRNA_3096 0.38 0.6
310,693 + 11464 mRNA_3096 0.38 0.3
310,851 + 11464 mRNA_3096 0.53 -0.3
310,993 - 11464 mRNA_3096 0.66 -2.5