Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1 + 0.2
1 + -0.2
1 + -0.7
21 + -0.4
21 + -1.5
21 + 0.7
41 + 0.4
42 + 0.1
44 + 0.7
79 - -0.5
79 + 0.1
149 - -1.4
264 + 11348 mRNA_2980 0.17 1.7
266 - 11348 mRNA_2980 0.17 -5.0
338 - 11348 mRNA_2980 0.22 -0.5
341 + 11348 mRNA_2980 0.22 0.2
454 - 11348 mRNA_2980 0.30 -0.3
484 - 11348 mRNA_2980 0.32 1.3
489 - 11348 mRNA_2980 0.33 0.6
491 + 11348 mRNA_2980 0.33 0.6
507 + 11348 mRNA_2980 0.34 2.0
510 + 11348 mRNA_2980 0.34 -0.5
516 - 11348 mRNA_2980 0.35 0.6
654 + 11348 mRNA_2980 0.44 0.2
719 + 11348 mRNA_2980 0.49 1.6
1,007 + 11348 mRNA_2980 0.69 -0.1
1,048 - 11348 mRNA_2980 0.72 -2.2
1,218 - 11348 mRNA_2980 0.84 -1.2
1,248 + 11348 mRNA_2980 0.86 -2.4
1,364 + -0.1
1,374 - 1.3
1,401 + -0.2
1,452 + -0.7
1,488 - -0.5
1,503 + -0.5
1,513 + -0.3
1,515 - -1.0
1,551 + -0.3
1,634 + 1.6
1,635 + -0.8
1,657 + 0.0
1,668 + 1.4
1,805 - 2.3
1,805 + -0.4
1,818 + -0.6
1,882 + -1.3
1,934 + 1.0
1,948 + -0.3
1,949 - 0.7
1,974 + 0.8
1,992 + 0.6
1,992 + 0.7
1,993 + 0.7
2,011 + -1.4
2,082 + -0.6
2,084 - -1.2
2,086 + -0.3
2,086 + -2.5
2,086 + -1.6
2,095 + -1.8
2,097 - -0.7
2,098 + -0.9
2,115 + -0.1
2,117 + -0.0
2,120 + -1.6
2,121 - 0.2
2,121 - -0.3
2,125 - 2.3
2,126 + 1.0
2,131 + -1.1
2,131 + -2.5
2,131 + -0.8
2,133 + -1.2
2,243 + -1.3
2,265 + 0.8
2,301 + 0.8
2,320 + -0.4
2,324 - -0.1
2,357 + 0.7