Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2961

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653159 to 654002 11328 mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654993 to 657914 11329 mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658359 to 659860 11330

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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654,382 + 0.7
654,495 - -1.8
654,517 - -0.8
654,672 + 0.3
654,931 - 1.1
654,942 + 0.4
655,078 + -2.6
655,367 - 11329 mRNA_2961 0.13 0.3
655,383 + 11329 mRNA_2961 0.13 -2.6
655,997 + 11329 mRNA_2961 0.34 -2.7
656,285 - 11329 mRNA_2961 0.44 -0.9
656,581 - 11329 mRNA_2961 0.54 -1.7
656,705 + 11329 mRNA_2961 0.59 -1.3
656,827 - 11329 mRNA_2961 0.63 -1.1
656,842 + 11329 mRNA_2961 0.63 -2.0
657,278 + 11329 mRNA_2961 0.78 -0.7
657,291 - 11329 mRNA_2961 0.79 -2.8
657,339 - 11329 mRNA_2961 0.80 -2.8
657,402 - 11329 mRNA_2961 0.82 1.2
657,470 - 11329 mRNA_2961 0.85 0.7
657,599 + 11329 mRNA_2961 0.89 -1.5
657,740 - 0.9
657,876 + -1.6
657,889 + -1.7
657,890 + 0.4
658,044 + 0.5
658,120 + 0.6
658,129 - 1.8
658,174 - 0.1
658,175 + -1.4
658,193 - -0.5
658,294 + 1.9
658,297 - -0.2
658,344 - 0.7
658,506 - 1.6
658,513 - 11330 mRNA_2962 0.10 -0.4
658,587 - 11330 mRNA_2962 0.15 -0.5
658,595 + 11330 mRNA_2962 0.16 -0.2
658,645 + 11330 mRNA_2962 0.19 0.8
658,791 - 11330 mRNA_2962 0.29 -0.0
658,886 + 11330 mRNA_2962 0.35 -1.3