Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2898

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479604 to 482899 11265 mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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482,083 - 11265 mRNA_2897 0.75 1.1
482,400 + 11265 mRNA_2897 0.85 -3.3
482,553 + 11265 mRNA_2897 0.89 -1.1
482,737 + 0.8
482,761 + -0.1
483,214 + -0.4
483,340 + -1.8
483,425 + 0.5
483,430 - -0.1
483,566 - 11266 mRNA_2898 0.10 0.4
483,572 + 11266 mRNA_2898 0.10 -0.8
483,583 - 11266 mRNA_2898 0.11 0.1
483,706 + 11266 mRNA_2898 0.13 -1.3
483,911 - 11266 mRNA_2898 0.16 2.5
483,990 + 11266 mRNA_2898 0.18 -1.4
484,433 + 11266 mRNA_2898 0.26 -1.2
484,529 + 11266 mRNA_2898 0.28 0.8
484,573 - 11266 mRNA_2898 0.29 -2.1
484,584 + 11266 mRNA_2898 0.29 0.4
484,730 + 11266 mRNA_2898 0.31 -0.2
484,894 + 11266 mRNA_2898 0.34 0.2
484,992 + 11266 mRNA_2898 0.36 1.2
485,157 + 11266 mRNA_2898 0.39 1.3
485,163 + 11266 mRNA_2898 0.39 1.1
485,292 + 11266 mRNA_2898 0.42 -2.0
485,498 + 11266 mRNA_2898 0.45 0.2
485,617 + 11266 mRNA_2898 0.48 -0.4
485,899 - 11266 mRNA_2898 0.53 -1.6
485,902 + 11266 mRNA_2898 0.53 0.4
486,134 - 11266 mRNA_2898 0.57 0.5
486,167 - 11266 mRNA_2898 0.58 -1.6
486,513 + 11266 mRNA_2898 0.64 -0.6
486,786 - 11266 mRNA_2898 0.69 -0.2
486,789 + 11266 mRNA_2898 0.69 -0.1
486,950 + 11266 mRNA_2898 0.72 -0.3
487,069 + 11266 mRNA_2898 0.74 -0.5
487,357 + 11266 mRNA_2898 0.79 -0.5
487,501 + 11266 mRNA_2898 0.82 -1.2
487,716 - 11266 mRNA_2898 0.86 -0.6
487,813 - 11266 mRNA_2898 0.87 -1.7
487,989 - 0.3
488,154 + 0.4
488,224 - -0.8
488,235 - -2.1
488,262 + -2.7
488,372 - -0.5
488,389 + 0.8
488,506 - 0.7
488,521 + 3.2
488,534 + -2.4
488,556 + -2.0
488,650 - -0.9
488,712 - 0.7
488,719 + 0.3
488,766 + 0.0
488,806 + -1.1
488,807 - 0.4
488,935 - 1.9
488,937 + 1.1
488,969 - -0.7
488,970 + -0.1
488,997 + 0.5
489,000 + 0.3
489,038 - 0.2