Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2804

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253457 to 256700 11171 mRNA_2804: 11172 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 257436 to 258912 11172 mRNA_2805: 11173 - KOG0128 RNA-binding protein SART3 (RRM superfamily), at 259286 to 263641 11173

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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256,596 - 1.1
256,602 - 1.0
256,603 - -0.0
256,615 - 0.9
256,784 + -3.6
256,797 + -0.7
256,890 - -0.2
256,909 + -1.7
256,923 + 0.4
256,927 + -1.4
256,935 + -2.0
256,940 + -0.5
257,059 + 1.0
257,070 - 0.5
257,073 + 0.9
257,079 + -1.5
257,090 - 1.3
257,202 - -2.5
257,211 + -0.9
257,214 - -0.4
257,219 + 0.4
257,237 + 0.2
257,240 - 1.3
257,368 + 0.3
258,247 - 11172 mRNA_2804 0.55 -2.1
258,677 - 11172 mRNA_2804 0.84 -2.2
258,701 - 11172 mRNA_2804 0.86 -2.0
258,812 + 0.7
258,814 - -0.7
258,820 + -2.1
259,091 - 0.1
259,096 - 1.6
259,100 + -0.7
259,116 - -1.4
259,128 + -0.5
259,146 + -0.7
259,151 - -0.4
259,203 + 0.7
259,255 - 0.5
259,283 + -1.7