Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2706

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2705: 11073 - Hypothetical Protein, at 46347 to 46971 11073 mRNA_2706: 11074 - HMMPfam-PLAC8 family-PF04749,TIGRFAM-A_thal_Cys_rich uncharacterized Cys-rich domain-TIGR01571, at 47300 to 48078 11074 mRNA_2707: 11075 - KOG0254 Predicted transporter (major facilitator superfamily), at 48524 to 50718 11075

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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46,324 + -0.9
46,340 + -0.2
46,342 - 0.2
46,346 - 1.1
46,364 + 0.2
46,481 - 11073 mRNA_2705 0.21 -0.7
46,643 - 11073 mRNA_2705 0.47 -0.5
46,779 + 11073 mRNA_2705 0.69 1.5
46,795 + 11073 mRNA_2705 0.72 -3.3
46,795 + 11073 mRNA_2705 0.72 -1.9
46,796 - 11073 mRNA_2705 0.72 -0.8
46,802 + 11073 mRNA_2705 0.73 -0.6
46,881 - 11073 mRNA_2705 0.85 -0.3
46,882 - 11073 mRNA_2705 0.86 0.4
46,893 + 11073 mRNA_2705 0.87 0.3
46,895 - 11073 mRNA_2705 0.88 0.5
46,909 + 0.1
46,911 + 0.3
46,948 + 0.6
46,951 + -0.1
46,959 + 1.1
46,965 + -1.3
46,997 + -0.3
46,998 - 1.2
47,002 - 0.7
47,014 + -0.2
47,028 + -1.6
47,051 - -0.3
47,055 - 0.1
47,064 - -0.1
47,065 + -0.3
47,067 + -1.0
47,078 + -0.5
47,093 - -1.3
47,117 - -0.4
47,121 + 0.7
47,174 + 0.2
47,183 - -0.5
47,249 + -0.0
47,260 - -0.2
47,365 - -0.3
47,405 + 11074 mRNA_2706 0.13 0.7
47,582 + 11074 mRNA_2706 0.36 -0.5
47,717 + 11074 mRNA_2706 0.54 -0.2
47,950 - 11074 mRNA_2706 0.83 -0.2
47,966 + 11074 mRNA_2706 0.85 1.0
48,263 + 0.4
48,325 - -1.1
48,540 + 0.0
48,700 - 1.4