Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2616

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2615: 10983 - K14775 UTP30, RSL1D1 ribosome biogenesis protein UTP30, at 602494 to 603879 10983 mRNA_2616: 10984 - KOG4076 Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins, at 604328 to 604979 10984 mRNA_2617: 10985 - HMMPfam-Carbonic anhydrase-PF00484,SMART-Carbonic anhydrase-SM00947,SUPERFAMILY--SSF53056, at 605466 to 606411 10985

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
603,935 + -0.7
603,941 + -1.7
603,944 + -1.5
603,991 + 0.2
604,007 + 1.6
604,112 - -0.5
604,128 + -0.3
604,271 + 0.2
604,542 - 10984 mRNA_2616 0.33 -2.0
604,663 - 10984 mRNA_2616 0.51 -2.7
604,703 - 10984 mRNA_2616 0.58 -1.1
604,716 + 10984 mRNA_2616 0.60 -3.7
604,891 + 10984 mRNA_2616 0.86 -1.4
604,960 + -3.2
604,984 - 0.8
605,013 - -1.2
605,027 - 0.1
605,029 + -0.3
605,030 - -0.0
605,153 - -0.4
605,163 - -1.0
605,166 + 0.4
605,169 - -0.8
605,177 - 1.4
605,182 + -1.7
605,183 + -1.3
605,213 + 0.5
605,314 + 0.0
605,314 + 3.5
605,317 + -1.6
605,750 + 10985 mRNA_2617 0.30 -0.3
605,920 - 10985 mRNA_2617 0.48 0.1