Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2574

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2573: 10941 - K03848 ALG6 alpha-1,3-glucosyltransferase, at 474232 to 477732 10941 mRNA_2574: 10942 - K10158 B3GAT3 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3, at 477863 to 478879 10942 mRNA_2575: 10943 - KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2, at 479011 to 480812 10943

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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476,925 + 10941 mRNA_2573 0.77 -2.4
477,467 - 0.4
477,479 + -0.4
477,770 - 0.6
477,793 + 0.2
477,795 + -0.6
477,795 + -0.1
477,810 - 0.5
477,881 - 0.8
477,939 + -0.2
477,966 - 10942 mRNA_2574 0.10 -0.1
478,008 + 10942 mRNA_2574 0.14 -1.7
478,075 - 10942 mRNA_2574 0.21 1.1
478,231 + 10942 mRNA_2574 0.36 -1.6
478,239 - 10942 mRNA_2574 0.37 -0.1
478,243 + 10942 mRNA_2574 0.37 -0.6
478,243 - 10942 mRNA_2574 0.37 -2.7
478,360 + 10942 mRNA_2574 0.49 -2.2
478,396 + 10942 mRNA_2574 0.52 -0.9
478,809 - -1.8
478,826 - -0.7
478,828 + -1.2
479,074 - -1.7
479,107 + -2.4
479,116 - -0.9
479,120 - -0.4
479,121 - -1.8
479,238 + 10943 mRNA_2575 0.13 -1.7
479,254 - 10943 mRNA_2575 0.13 -1.1
479,367 - 10943 mRNA_2575 0.20 -0.2
479,544 + 10943 mRNA_2575 0.30 -2.7
479,618 - 10943 mRNA_2575 0.34 -0.4