Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2550

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2549: 10917 - HMMPfam-Chromatin modification-related protein EAF7-PF07904, at 423711 to 424964 10917 mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425175 to 426192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426245 to 427122 10919

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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424,308 + 10917 mRNA_2549 0.48 0.1
424,972 + -0.1
424,993 + -1.6
424,995 - -2.5
425,023 - 1.7
425,284 - 10918 mRNA_2550 0.11 -2.5
425,287 - 10918 mRNA_2550 0.11 0.4
425,296 + 10918 mRNA_2550 0.12 0.1
425,438 - 10918 mRNA_2550 0.26 -2.2
425,440 - 10918 mRNA_2550 0.26 -1.8
425,720 - 10918 mRNA_2550 0.54 0.7
425,726 + 10918 mRNA_2550 0.54 -1.0
425,981 - 10918 mRNA_2550 0.79 -0.2
426,130 - 0.3
426,161 + -0.9
426,599 - 10919 mRNA_2551 0.40 -0.2
426,608 + 10919 mRNA_2551 0.41 -0.4
426,891 + 10919 mRNA_2551 0.74 0.2