Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2497

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2496: 10864 - KOG0254 Predicted transporter (major facilitator superfamily), at 288113 to 290739 10864 mRNA_2497: 10865 - KOG0379 Kelch repeat-containing proteins, at 291079 to 294153 10865

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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290,112 - 10864 mRNA_2496 0.76 0.2
290,113 + 10864 mRNA_2496 0.76 0.1
290,155 + 10864 mRNA_2496 0.78 -0.8
290,193 + 10864 mRNA_2496 0.79 -2.3
290,196 - 10864 mRNA_2496 0.79 1.0
290,263 - 10864 mRNA_2496 0.82 0.1
290,345 + 10864 mRNA_2496 0.85 -0.6
290,392 - 10864 mRNA_2496 0.87 -1.2
290,455 + 10864 mRNA_2496 0.89 0.0
290,495 - 0.3
290,536 - 1.6
290,539 - 0.2
290,554 + -1.5
290,559 + -0.6
290,562 + -0.8
290,562 + -0.2
290,593 + 0.0
290,612 + 0.8
290,634 + 1.3
290,702 + 0.4
290,724 + -0.0
290,751 - 0.4
290,827 - 0.4
290,957 + -0.1
290,994 + 0.6
291,053 - -1.8
291,085 + -1.9
291,127 - 0.7
291,472 - 10865 mRNA_2497 0.13 -0.2
291,495 + 10865 mRNA_2497 0.14 -0.1
291,764 - 10865 mRNA_2497 0.22 0.1
291,878 + 10865 mRNA_2497 0.26 1.9
291,891 - 10865 mRNA_2497 0.26 -0.6
292,231 + 10865 mRNA_2497 0.37 0.2
292,528 - 10865 mRNA_2497 0.47 0.2
292,601 + 10865 mRNA_2497 0.49 -0.9
292,683 + 10865 mRNA_2497 0.52 -0.5
292,950 + 10865 mRNA_2497 0.61 -1.4
293,400 + 10865 mRNA_2497 0.75 0.5
293,728 + 10865 mRNA_2497 0.86 0.6
293,943 + -0.6
293,966 - -0.5
293,976 + -0.6
293,998 - -1.1
294,134 + 1.1
294,299 - 0.2
294,326 - -0.9
294,438 - -1.1
294,450 - -1.5
294,543 - 0.8
294,578 - 0.3
294,580 - -0.6
294,717 + 0.5
294,729 - -0.2
294,731 + -1.3
294,738 - 0.7
294,773 - -0.3
294,855 - -0.7
294,863 - -0.0
294,869 + -0.8
294,875 + 0.7
294,875 - -0.4
294,879 + -1.4
294,888 + 0.3
294,915 + -2.2
294,918 - 0.3
294,991 - -0.1
294,996 - 0.3
295,011 + -0.7
295,015 + 0.4
295,025 - -0.6
295,028 + -1.6
295,036 + -1.0
295,037 + -0.0
295,039 - 1.2
295,041 - -1.4
295,042 + -1.5
295,044 - -1.4
295,045 + 0.5
295,045 - -0.3
295,048 + -3.9
295,048 - -0.1
295,050 + -0.4
295,054 + -1.3
295,069 + -0.4
295,083 + 0.6
295,099 + -0.4
295,101 - -1.5