Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2409

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2408: 10776 - K07975 K07975 Rho family, other, at 55235 to 56824 10776 mRNA_2409: 10777 - Hypothetical Protein, at 56909 to 58334 10777 mRNA_2410: 10778 - Hypothetical Protein, at 59167 to 60066 10778

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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56,154 + 10776 mRNA_2408 0.58 -1.2
56,323 + 10776 mRNA_2408 0.68 0.6
56,374 - 10776 mRNA_2408 0.72 0.3
56,393 + 10776 mRNA_2408 0.73 -0.1
56,410 - 10776 mRNA_2408 0.74 -3.5
56,503 + 10776 mRNA_2408 0.80 -2.3
56,511 - 10776 mRNA_2408 0.80 -2.7
56,652 - 10776 mRNA_2408 0.89 -0.5
56,763 + -0.1
56,764 + 0.6
56,792 - -0.1
56,927 - -0.2
56,941 - -0.4
56,953 + -0.8
57,091 + 10777 mRNA_2409 0.13 -0.9
57,101 + 10777 mRNA_2409 0.13 -1.1
57,130 - 10777 mRNA_2409 0.15 1.2
57,384 + 10777 mRNA_2409 0.33 -0.1
57,701 + 10777 mRNA_2409 0.56 -0.1
57,979 + 10777 mRNA_2409 0.75 -0.4
58,106 + 10777 mRNA_2409 0.84 -1.6
58,113 + 10777 mRNA_2409 0.84 -1.2
58,412 + 0.2
58,445 + -1.7
58,542 + -0.5
58,691 - -0.1
58,699 + 0.4
58,699 - 0.1
58,824 - 0.2
58,851 - -0.1
58,935 - -1.3
58,999 - 0.7
59,010 + 0.4
59,017 - 0.2
59,028 + -0.5
59,035 + -0.4
59,042 + -1.8
59,054 - -0.1
59,153 - 0.4
59,154 + 0.3
59,162 + -1.3
59,170 - -0.0
59,304 + 10778 mRNA_2410 0.15 0.6
59,323 + 10778 mRNA_2410 0.17 -1.0