Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2303

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2302: 10670 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 563015 to 564806 10670 mRNA_2303: 10671 - Hypothetical Protein, at 565712 to 566657 10671 mRNA_2304: 10672 - Hypothetical Protein, at 567046 to 568484 10672

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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564,716 + 0.1
564,717 + -2.2
564,725 + 0.6
564,763 - 0.2
564,862 + 0.1
564,863 + -1.0
564,867 + -0.8
564,870 + -1.5
564,875 - -2.8
564,886 - 0.5
564,892 + -0.4
564,982 + 0.5
564,987 - -0.0
564,989 + -0.3
564,996 - -3.5
564,997 + -0.7
564,998 - -0.6
565,002 + -0.5
565,009 + 1.0
565,109 - 0.2
565,134 + 0.3
565,136 + 1.5
565,162 + -0.9
565,181 + -0.5
565,188 - -2.7
565,194 + 0.5
565,194 + -1.7
565,207 + -0.6
565,223 + -1.2
565,315 + -0.4
565,316 + 0.2
565,327 - 0.7
565,333 - 0.2
565,339 + -1.1
565,360 - 0.0
565,377 - -0.8
565,388 + -0.1
565,390 - 0.6
565,391 + -0.3
565,395 - -0.9
565,405 + 0.0
565,408 + 0.7
565,416 - -2.5
565,416 + 0.4
565,427 - -0.5
565,432 - 0.2
565,433 + 0.3
565,456 + 0.1
565,561 - 0.0
565,601 + -1.4
566,216 + 10671 mRNA_2303 0.53 0.3
566,359 + 10671 mRNA_2303 0.68 -0.8
566,486 - 10671 mRNA_2303 0.82 0.2
566,630 + -0.4
566,763 - 0.1
566,765 - -2.6
566,765 - -2.2
566,891 - 0.2
567,210 - 10672 mRNA_2304 0.11 0.7
567,228 - 10672 mRNA_2304 0.13 -0.1
567,358 - 10672 mRNA_2304 0.22 -0.0
567,513 + 10672 mRNA_2304 0.32 -1.6
567,526 + 10672 mRNA_2304 0.33 0.1