Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2106

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2105: 10473 - K17991 PXG peroxygenase, at 85042 to 86447 10473 mRNA_2106: 10474 - K15710 SHPRH E3 ubiquitin-protein ligase SHPRH, at 86774 to 93150 10474 mRNA_2107: 10475 - K01918 panC pantoate--beta-alanine ligase, at 93856 to 95198 10475

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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86,084 - 10473 mRNA_2105 0.74 -0.5
86,133 - 10473 mRNA_2105 0.78 1.0
86,249 - 10473 mRNA_2105 0.86 1.3
86,386 + 1.0
86,489 - -0.5
86,530 + 0.1
86,581 + -0.2
86,654 - -0.2
86,694 - -1.1
86,735 + 0.9
86,795 - -0.9
86,812 - -0.5
86,981 - -1.2
87,006 + -1.5
87,077 + -2.3
87,117 + 0.8
87,301 + 0.0
87,327 + -1.4
87,419 - 10474 mRNA_2106 0.10 -0.1
87,432 - 10474 mRNA_2106 0.10 0.7
87,435 + 10474 mRNA_2106 0.10 -2.2
87,558 - 10474 mRNA_2106 0.12 0.0
88,069 - 10474 mRNA_2106 0.20 0.4
88,121 - 10474 mRNA_2106 0.21 -0.4
88,146 - 10474 mRNA_2106 0.22 0.8
88,150 - 10474 mRNA_2106 0.22 -0.6
88,161 + 10474 mRNA_2106 0.22 -1.3
88,170 - 10474 mRNA_2106 0.22 -0.3
88,263 + 10474 mRNA_2106 0.23 0.1
88,372 + 10474 mRNA_2106 0.25 1.5
88,661 + 10474 mRNA_2106 0.30 0.6
89,306 - 10474 mRNA_2106 0.40 0.4
89,354 - 10474 mRNA_2106 0.40 -1.0
89,505 + 10474 mRNA_2106 0.43 -0.8
89,534 - 10474 mRNA_2106 0.43 -0.7
89,544 + 10474 mRNA_2106 0.43 -0.5
89,544 + 10474 mRNA_2106 0.43 -0.1
89,603 + 10474 mRNA_2106 0.44 -0.7
89,619 + 10474 mRNA_2106 0.45 -0.1
89,807 - 10474 mRNA_2106 0.48 1.0
90,128 - 10474 mRNA_2106 0.53 -0.5
90,263 - 10474 mRNA_2106 0.55 -1.4
90,273 - 10474 mRNA_2106 0.55 0.4
90,285 + 10474 mRNA_2106 0.55 -1.7
90,295 - 10474 mRNA_2106 0.55 -0.4
90,419 + 10474 mRNA_2106 0.57 -1.7
90,452 - 10474 mRNA_2106 0.58 0.5
90,543 + 10474 mRNA_2106 0.59 -0.0
90,816 - 10474 mRNA_2106 0.63 -0.7
91,252 - 10474 mRNA_2106 0.70 0.2
91,566 + 10474 mRNA_2106 0.75 0.9
91,703 + 10474 mRNA_2106 0.77 -0.5
91,732 - 10474 mRNA_2106 0.78 -1.0
91,872 - 10474 mRNA_2106 0.80 -1.4
91,875 + 10474 mRNA_2106 0.80 0.4
92,270 + 10474 mRNA_2106 0.86 0.8
92,299 - 10474 mRNA_2106 0.87 -0.4
92,757 - 0.6
92,912 + -1.3
93,027 + 0.3
93,052 - -1.2
93,165 - -0.6
93,174 - -1.3
93,202 - 0.6
93,246 + 0.7
93,343 + -0.6
93,364 + 1.3
93,539 + -0.4
93,807 + 1.4
93,893 - 0.6
93,944 - -0.5
94,085 + 10475 mRNA_2107 0.17 1.0