Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1916

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1915: 10283 - K03063 PSMC4, RPT3 26S proteasome regulatory subunit T3, at 506230 to 507925 10283 mRNA_1916: 10284 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Domain of unknown function (DUF3425)-PF11905,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 508004 to 509890 10284 mRNA_1917: 10285 - K04488 iscU, nifU nitrogen fixation protein NifU and related proteins, at 510192 to 511246 10285

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
507,920 + 0.8
507,927 + -0.2
508,043 - -0.4
508,043 + -0.2
508,504 + 10284 mRNA_1916 0.26 -0.0
509,354 + 10284 mRNA_1916 0.72 -1.7
509,488 - 10284 mRNA_1916 0.79 -0.9
509,628 - 10284 mRNA_1916 0.86 -0.1
509,771 - 0.7
509,890 - -0.2
509,930 - -3.0
510,245 + -1.0