Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1910

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493180 to 495383 10277 mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495564 to 497825 10278 mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497993 to 499871 10279

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
494,695 - 10277 mRNA_1909 0.69 -0.5
495,117 - 10277 mRNA_1909 0.88 2.2
495,133 + 10277 mRNA_1909 0.89 0.9
495,135 + 10277 mRNA_1909 0.89 -1.0
495,150 - 10277 mRNA_1909 0.89 0.7
495,264 - 1.3
495,266 - -0.4
495,277 + 1.9
495,286 + 0.9
495,292 - -0.1
495,328 - -2.0
495,408 + -0.4
495,440 + 0.3
495,465 + -1.5
495,752 - 0.6
495,916 - 10278 mRNA_1910 0.16 -1.6
496,028 + 10278 mRNA_1910 0.21 -2.0
496,165 + 10278 mRNA_1910 0.27 -0.5
496,297 + 10278 mRNA_1910 0.32 -0.1
496,327 + 10278 mRNA_1910 0.34 -0.8
496,604 - 10278 mRNA_1910 0.46 0.5
496,874 - 10278 mRNA_1910 0.58 -1.5
496,921 - 10278 mRNA_1910 0.60 -1.9
497,026 - 10278 mRNA_1910 0.65 -1.5
497,045 - 10278 mRNA_1910 0.65 -0.5
497,612 + -0.9
497,615 + -0.3
497,903 - -0.1
497,906 + 0.1
497,915 - -1.9
497,916 + -2.0
497,932 + 1.0
497,934 + 0.0
498,067 + -2.5
498,072 - -3.8
498,512 + 10279 mRNA_1911 0.28 -2.9