Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1669

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1668: 10036 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 848567 to 849208 10036 mRNA_1669: 10037 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 849506 to 850957 10037 mRNA_1670: 10038 - K15918 GLYK D-glycerate 3-kinase, at 851334 to 852644 10038

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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848,543 - -0.9
848,582 - -1.3
848,869 - 10036 mRNA_1668 0.47 -1.6
849,033 - 10036 mRNA_1668 0.73 -0.8
849,281 + -1.6
849,596 + 0.7
849,763 + 10037 mRNA_1669 0.18 -0.1
850,040 + 10037 mRNA_1669 0.37 -0.6
850,462 - 10037 mRNA_1669 0.66 0.6
850,727 - 10037 mRNA_1669 0.84 -1.4
850,766 + 10037 mRNA_1669 0.87 -1.2
850,921 + -1.3
851,019 - -0.1
851,037 - -1.6
851,047 - 0.6
851,047 - 0.1
851,049 + -0.1
851,055 + -1.3
851,062 - 0.8
851,063 - -0.2
851,082 - -0.1
851,085 + -0.7
851,092 + 1.0
851,098 - -1.2
851,099 - -1.1
851,105 + -0.3
851,142 + 0.2
851,186 + -0.5
851,343 + -0.2
851,344 + 0.5
851,346 - 1.0
851,452 + -0.9
851,460 - -0.6
851,670 + 10038 mRNA_1670 0.26 -0.2
851,738 - 10038 mRNA_1670 0.31 -0.2
851,787 - 10038 mRNA_1670 0.35 1.1