Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1659

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1658: 10026 - K02893 RP-L23Ae, RPL23A large subunit ribosomal protein L23Ae, at 826831 to 828048 10026 mRNA_1659: 10027 - K08741 MSH5 DNA mismatch repair protein MSH5, at 828859 to 833266 10027 mRNA_1660: 10028 - Hypothetical Protein, at 833434 to 834294 10028

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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828,235 + -0.4
828,264 + 0.4
828,271 + -0.8
828,272 + -1.1
828,277 + -2.2
828,417 + -1.9
828,720 - -0.9
829,001 + -1.1
829,022 - 0.3
829,090 - -0.3
829,227 + 0.8
829,560 + 10027 mRNA_1659 0.16 0.1
830,296 + 10027 mRNA_1659 0.33 0.9
830,375 + 10027 mRNA_1659 0.34 0.8
830,598 + 10027 mRNA_1659 0.39 2.1
831,034 + 10027 mRNA_1659 0.49 0.2
831,146 - 10027 mRNA_1659 0.52 -1.0
831,607 - 10027 mRNA_1659 0.62 0.8
831,720 - 10027 mRNA_1659 0.65 0.2
831,741 + 10027 mRNA_1659 0.65 -1.8
831,901 + 10027 mRNA_1659 0.69 -1.5
831,997 + 10027 mRNA_1659 0.71 -1.0
832,044 + 10027 mRNA_1659 0.72 -2.5
832,063 + 10027 mRNA_1659 0.73 -1.9
832,165 + 10027 mRNA_1659 0.75 -0.3
832,287 + 10027 mRNA_1659 0.78 0.3
832,368 + 10027 mRNA_1659 0.80 -3.8
832,455 - 10027 mRNA_1659 0.82 1.2
832,595 + 10027 mRNA_1659 0.85 -1.6
832,635 - 10027 mRNA_1659 0.86 -3.2
832,738 - 10027 mRNA_1659 0.88 -0.3
832,785 + 10027 mRNA_1659 0.89 -1.1
832,895 - -2.2
833,026 + -0.2
833,027 - 0.5
833,066 - -1.9
833,193 - -0.8
833,328 - -0.8
833,332 - 1.0
833,345 - -0.0
833,370 + -0.5
833,471 + -3.2
833,506 + -0.4
833,523 - 10028 mRNA_1660 0.10 -2.8
833,659 + 10028 mRNA_1660 0.26 -1.6
833,805 + 10028 mRNA_1660 0.43 0.3
833,930 + 10028 mRNA_1660 0.58 -3.7
833,931 - 10028 mRNA_1660 0.58 0.2