Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1244

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738287 to 739305 9611 mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739687 to 741319 9612 mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741721 to 743435 9613

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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739,182 + 9611 mRNA_1243 0.88 0.7
739,310 + -0.7
739,455 - 0.4
739,458 - 1.3
739,461 + -0.1
739,480 + 0.4
739,596 - -0.9
739,606 - -0.5
739,609 - 1.5
739,628 - -0.7
739,634 - -0.7
739,635 + 0.1
739,639 + 0.1
739,770 + -2.5
739,771 - 0.3
739,778 + 0.1
739,782 + 0.1
739,914 - 9612 mRNA_1244 0.14 -0.3
739,918 - 9612 mRNA_1244 0.14 1.0
739,963 - 9612 mRNA_1244 0.17 -2.2
740,346 + 9612 mRNA_1244 0.40 0.5
740,411 - 9612 mRNA_1244 0.44 0.6
740,421 + 9612 mRNA_1244 0.45 0.5
740,555 - 9612 mRNA_1244 0.53 -0.1
740,562 + 9612 mRNA_1244 0.54 -2.1
740,608 + 9612 mRNA_1244 0.56 0.3
740,635 + 9612 mRNA_1244 0.58 0.1
740,906 + 9612 mRNA_1244 0.75 -0.8
741,093 - 9612 mRNA_1244 0.86 0.4
741,258 + 1.8
741,354 + 0.3
741,529 + 1.0
741,636 - 0.6
741,654 - 0.2
741,660 - -2.0
741,948 - 9613 mRNA_1245 0.13 -0.6