Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1202

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1202: 9570 - K11253 H3 histone H3, at 640154 to 640968 9570 mRNA_1203: 9571 - K01049 ACHE acetylcholinesterase, at 641657 to 643946 9571

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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639,300 - -0.7
639,315 - -2.4
639,322 + -0.6
639,325 + 0.2
639,731 - -1.0
639,736 - -0.7
639,737 + -0.3
639,738 + -1.3
639,740 + -0.6
639,744 + 1.0
639,746 - -0.4
639,749 - 0.6
639,754 - 0.4
639,759 - 1.0
639,761 - -0.2
639,763 + -0.8
639,764 + -1.5
639,765 + -0.1
639,766 + 0.5
639,766 - 0.3
639,767 - 0.1
639,769 - 1.0
639,771 - 1.1
639,780 - -1.5
639,781 + 0.0
639,781 + 0.1
639,783 + -0.5
639,790 - 2.3
639,810 + -0.5
639,817 - 0.5
639,852 - 0.7
639,854 - 1.5
639,876 - 0.9
639,876 - -0.5
640,019 - 2.0
640,033 - -0.1
640,280 + 9570 mRNA_1202 0.15 0.2
640,325 + 9570 mRNA_1202 0.21 0.2
640,465 + 9570 mRNA_1202 0.38 -0.3
640,469 + 9570 mRNA_1202 0.39 0.4
641,169 + -0.2
641,177 - -2.2
641,207 - -0.6
641,310 - 0.7
641,318 - -0.2
641,322 - 0.2
641,350 + 0.1
641,365 + 0.1
641,370 + -0.6
641,392 + -0.6
641,395 + 0.1
641,408 - 2.1
641,414 - 1.1
641,417 - 0.2
641,422 + -0.2
641,429 + 0.1
641,485 + -0.4
641,491 + -0.5
641,493 - -1.3
641,494 + -0.4
641,510 + -0.1
641,527 + 0.7
641,528 + 0.5
641,544 + 0.0
641,562 - -0.2
641,594 + -0.3
641,614 - 2.3
641,628 - 0.2
641,667 - 0.3
641,849 + -1.8
641,921 + 9571 mRNA_1203 0.12 2.5
641,948 + 9571 mRNA_1203 0.13 -1.2
641,957 + 9571 mRNA_1203 0.13 0.4