Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1125

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458374 to 459990 9492 mRNA_1125: 9493 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 460316 to 462771 9493 mRNA_1126: 9494 - K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase, at 463118 to 466210 9494

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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459,403 + 9492 mRNA_1124 0.64 2.4
459,958 - 1.1
459,988 - 1.1
460,185 - 0.4
460,255 + 0.8
460,419 - -1.3
460,556 - 0.5
461,435 + 9493 mRNA_1125 0.46 -0.6
461,593 + 9493 mRNA_1125 0.52 -0.8
462,019 - 9493 mRNA_1125 0.69 -0.3
462,296 + 9493 mRNA_1125 0.81 -0.7
462,310 - 9493 mRNA_1125 0.81 -0.7
462,313 + 9493 mRNA_1125 0.81 -1.7
462,422 + 9493 mRNA_1125 0.86 1.0
462,428 + 9493 mRNA_1125 0.86 0.7
462,444 + 9493 mRNA_1125 0.87 2.1
462,574 + 0.6
462,741 + 0.6
462,902 + -3.1
462,906 + 1.0
463,049 - 0.9
463,138 + -1.0
463,281 - -0.9
463,290 + 0.5
463,343 - -1.8
463,723 + 9494 mRNA_1126 0.20 0.7