Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1077

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1076: 9444 - K02324 POLE1 DNA polymerase epsilon subunit 1, at 348660 to 356355 9444 mRNA_1077: 9445 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 356751 to 359055 9445 mRNA_1078: 9446 - K00784 rnz ribonuclease Z, at 359854 to 363039 9446

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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356,462 + 0.3
356,507 - -1.5
356,512 - 1.2
356,521 + 0.2
356,526 - -0.2
356,526 - -0.3
356,528 + -0.9
356,538 + -2.3
356,553 + -0.9
356,643 - -3.1
356,822 - 0.9
356,838 + 0.5
356,838 + 0.2
356,839 + -0.2
357,110 + 9445 mRNA_1077 0.16 0.0
357,117 + 9445 mRNA_1077 0.16 -0.2
357,129 - 9445 mRNA_1077 0.16 -0.6
357,384 + 9445 mRNA_1077 0.27 -0.9
357,419 - 9445 mRNA_1077 0.29 -1.9
357,562 - 9445 mRNA_1077 0.35 1.1
357,685 - 9445 mRNA_1077 0.41 -0.5
357,718 + 9445 mRNA_1077 0.42 0.8
357,720 + 9445 mRNA_1077 0.42 0.0
357,749 + 9445 mRNA_1077 0.43 -2.4
357,880 - 9445 mRNA_1077 0.49 0.3
357,919 + 9445 mRNA_1077 0.51 -1.0
358,045 - 9445 mRNA_1077 0.56 -1.9
358,600 + 9445 mRNA_1077 0.80 -0.9
358,737 + 9445 mRNA_1077 0.86 1.0
358,758 - 9445 mRNA_1077 0.87 0.7
358,909 - 1.1
359,223 + 0.3
359,285 - 0.7
359,331 - -0.3
359,338 + -0.4
359,572 - 0.3
359,574 - 0.8
359,574 - 0.1
359,574 - -0.7
359,581 + 0.1
359,605 - 0.2
359,619 + 0.3
359,620 + -2.2
359,648 - 1.0