Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1052

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277584 to 281665 9419 mRNA_1052: 9420 - K10896 FANCM fanconi anemia group M protein, at 282030 to 286830 9420 mRNA_1053: 9421 - KOG3856 Uncharacterized conserved protein, at 287075 to 287902 9421

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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281,194 - 9419 mRNA_1051 0.88 -0.4
281,482 - 0.3
281,640 + -1.1
281,799 - 0.8
281,809 - 0.0
281,815 - 1.2
281,817 + -0.6
281,819 - -0.2
281,841 - 0.8
281,932 - 1.2
281,951 - 0.0
281,966 - 1.3
281,986 + 2.3
282,006 + 0.1
282,080 + -3.0
282,129 - -1.1
282,161 + -1.0
282,407 + -0.3
282,438 + 1.3
282,494 + 0.1
282,502 + 0.3
282,574 - 9420 mRNA_1052 0.11 -0.2
283,148 - 9420 mRNA_1052 0.23 1.0
283,283 - 9420 mRNA_1052 0.26 -0.2
283,298 + 9420 mRNA_1052 0.26 0.4
283,496 + 9420 mRNA_1052 0.31 0.9
283,515 - 9420 mRNA_1052 0.31 0.3
283,689 + 9420 mRNA_1052 0.35 0.5
283,772 + 9420 mRNA_1052 0.36 -0.6
284,028 + 9420 mRNA_1052 0.42 0.5
284,123 - 9420 mRNA_1052 0.44 -1.0
284,178 + 9420 mRNA_1052 0.45 -0.0
284,306 - 9420 mRNA_1052 0.47 -2.3
284,309 - 9420 mRNA_1052 0.47 -3.4
284,421 - 9420 mRNA_1052 0.50 -2.1
284,441 + 9420 mRNA_1052 0.50 -2.2
284,818 - 9420 mRNA_1052 0.58 -0.2
284,899 + 9420 mRNA_1052 0.60 0.8
285,019 + 9420 mRNA_1052 0.62 -2.2
285,327 + 9420 mRNA_1052 0.69 0.5
285,402 + 9420 mRNA_1052 0.70 -1.2
285,801 + 9420 mRNA_1052 0.79 -1.0
286,049 + 9420 mRNA_1052 0.84 0.3
286,140 - 9420 mRNA_1052 0.86 0.3
286,200 + 9420 mRNA_1052 0.87 -2.7
286,212 + 9420 mRNA_1052 0.87 -0.4
286,321 + 9420 mRNA_1052 0.89 1.5
286,664 - 1.3
286,738 - 0.6
286,768 - 0.3
286,813 - -0.3
286,946 + 0.3
287,085 + -2.0