Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1026

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232781 to 233762 9393 mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233944 to 234631 9394 mRNA_1027: 9395 - Hypothetical Protein, at 235522 to 235827 9395

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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233,809 - 0.5
233,815 - 0.4
233,820 + 1.5
233,822 + -0.5
233,825 - -0.7
233,825 - 0.6
233,839 - -0.6
233,843 - -0.2
233,846 + -0.3
233,851 + 0.1
233,874 + 0.3
233,945 - -0.2
233,954 - -0.8
233,965 - -0.8
233,971 - 0.3
233,974 - -0.4
233,974 + 1.1
233,986 - 0.2
233,986 - -0.7
234,056 - 9394 mRNA_1026 0.16 0.4
234,127 + 9394 mRNA_1026 0.27 -1.1
234,130 - 9394 mRNA_1026 0.27 -1.7
234,880 + 0.2
235,005 - -0.0
235,013 + 0.4
235,271 - -0.2
235,484 + -1.1
235,488 + -0.3
235,492 - -1.2
235,594 - 9395 mRNA_1027 0.24 -0.7