Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1 + 2.0
1 + 0.4
1 + -0.3
1 + 0.3
1 + -0.0
2 + 0.4
2 + 0.1
5 + 1.3
18 + 0.5
30 + -0.5
37 + 0.9
37 + -0.2
41 + 0.4
42 + -1.4
44 + 1.3
49 + 1.0
49 + -1.1
50 + 0.2
54 + 0.3
58 - -1.4
60 - -0.3
60 + -0.8
60 - 0.3
61 - -1.8
61 + -1.4
63 + -1.0
63 + 1.0
63 + -1.5
63 + 2.0
63 + 0.2
63 + -0.5
64 + 0.4
66 - -0.0
66 + -0.5
70 + -0.4
70 + 0.5
70 - 0.5
71 + 0.1
73 + -1.0
75 - 2.2
77 - -0.1
78 + -1.4
78 - -0.0
78 + -0.1
78 + 2.2
78 + 0.2
78 + -0.2
78 + 0.3
78 + 1.2
78 + -0.6
79 + -0.7
81 - -1.6
81 - 0.5
82 + -0.1
85 + -0.7
104 + -0.1
126 + -0.0
126 + 2.8
128 - -0.9
135 + 0.2
142 + 0.5
150 + -0.1
154 + 1.8
157 + -0.2
171 - -0.5
171 + -1.0
172 + 0.0
172 + 1.4
175 - 1.1
176 - -0.2
177 - 0.1
177 - 0.4
191 - -0.3
192 + -0.7
192 + -0.9
192 + 0.9
193 + 0.8
193 + 0.5
193 + -0.6
198 - -0.6
218 + -0.0
225 + -0.6
235 + -1.4
242 + -0.7
263 - -0.6
293 + -0.8
303 + 0.2
333 - -1.5
339 - -0.0
348 + 0.2
349 + -0.2
377 - 0.8
381 - -2.0
469 + -1.4
487 - 9298 mRNA_930 0.10 -0.3
722 + 9298 mRNA_930 0.29 -1.7
1,641 - 2.4
1,656 - -0.5
1,768 - -0.1
1,778 - 1.3
1,794 + -0.0