Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_619

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_618: 8986 - HMMPfam-PX domain-PF00787,ProSiteProfiles-PX domain profile.-PS50195,SUPERFAMILY--SSF64268, at 1482898 to 1485797 8986 mRNA_619: 8987 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1486682 to 1488921 8987 mRNA_620: 8988 - K17742 SOU1 sorbose reductase, at 1489486 to 1490787 8988

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,485,780 + -0.6
1,485,784 + 0.8
1,485,889 - -2.8
1,485,920 + -0.0
1,485,925 - 0.6
1,485,937 + 0.0
1,486,062 + 0.3
1,486,075 - -0.0
1,486,097 + -0.1
1,486,115 - 0.9
1,486,116 + 0.2
1,486,116 + -1.3
1,486,117 + 0.3
1,486,117 - 0.8
1,486,117 + -1.3
1,486,125 - -1.2
1,486,138 - 0.2
1,486,146 - -0.7
1,486,149 - -0.9
1,486,150 + -0.7
1,486,151 - -0.9
1,486,152 + -0.3
1,486,152 + 0.3
1,486,173 - 1.1
1,486,177 - -0.0
1,486,183 - 0.0
1,486,189 - -1.2
1,486,192 - 0.5
1,486,194 - 0.2
1,486,197 + -0.0
1,486,200 + 2.4
1,486,202 + 0.5
1,486,224 - 0.3
1,486,236 - 0.3
1,486,241 + 0.5
1,486,256 - 0.0
1,486,259 - 1.4
1,486,274 - 0.8
1,486,275 + -0.4
1,486,276 + -0.1
1,486,279 + 0.3
1,486,279 + -1.3
1,486,280 - -0.3
1,486,283 + 0.3
1,486,286 - -0.1
1,486,291 + -1.8
1,486,295 + -1.2
1,486,297 + -2.0
1,486,303 - -1.4
1,486,328 - 0.6
1,486,331 - -0.3
1,486,337 - -0.4
1,486,337 + 1.2
1,486,337 + -0.2
1,486,362 - -0.4
1,486,364 + 0.7
1,486,374 - -0.6
1,486,375 - -0.6
1,486,383 + -0.4
1,486,385 - 0.3
1,486,385 - -0.7
1,486,395 + -2.7
1,486,664 - 0.3
1,486,664 + -0.0
1,487,092 - 8987 mRNA_619 0.18 -1.3
1,487,525 - 8987 mRNA_619 0.38 -0.3
1,487,746 - 8987 mRNA_619 0.47 -2.1
1,487,798 - 8987 mRNA_619 0.50 1.3
1,487,807 - 8987 mRNA_619 0.50 -0.6
1,487,932 - 8987 mRNA_619 0.56 -2.2
1,488,547 - 8987 mRNA_619 0.83 0.5
1,488,706 - -0.4
1,488,956 - -2.5
1,489,180 - 1.0
1,489,194 + -1.3
1,489,233 + -1.3
1,489,258 - 0.4
1,489,273 - 0.3
1,489,276 + -1.1
1,489,280 + -0.0
1,489,285 - 0.0
1,489,290 + 0.1
1,489,299 + -0.3
1,489,304 - -0.6
1,489,312 + -1.3
1,489,312 + -0.0
1,489,417 + 1.0
1,489,433 - -1.0
1,489,446 - 0.3
1,489,447 + 0.4
1,489,465 + -0.7
1,489,469 + 0.2
1,489,578 - -1.4
1,489,595 + -0.5
1,489,595 + 0.2
1,489,748 + 8988 mRNA_620 0.20 -2.4
1,489,882 - 8988 mRNA_620 0.30 -0.4
1,489,889 + 8988 mRNA_620 0.31 0.3