Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_216

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_215: 8583 - Hypothetical Protein, at 533781 to 534618 8583 mRNA_216: 8584 - BLAST protein of choline transporter-like family [Rhodo..., at 534909 to 538209 8584 mRNA_217: 8585 - K02292 crtO beta-carotene ketolase (CrtO type), at 538550 to 540960 8585

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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533,939 + 8583 mRNA_215 0.19 -1.5
534,101 + 8583 mRNA_215 0.38 0.0
534,512 - 8583 mRNA_215 0.87 -0.2
534,563 - -0.6
534,575 + -1.8
534,575 + -0.3
534,826 - -1.5
534,857 + -2.1
535,057 + -0.6
535,588 + 8584 mRNA_216 0.21 0.8
535,825 + 8584 mRNA_216 0.28 0.2
535,859 + 8584 mRNA_216 0.29 1.0
535,967 + 8584 mRNA_216 0.32 0.3
535,969 + 8584 mRNA_216 0.32 0.7
535,980 + 8584 mRNA_216 0.32 -0.2
535,991 - 8584 mRNA_216 0.33 1.6
536,009 - 8584 mRNA_216 0.33 -1.7
536,018 + 8584 mRNA_216 0.34 -0.1
536,019 - 8584 mRNA_216 0.34 -0.4
536,033 + 8584 mRNA_216 0.34 -0.7
536,060 + 8584 mRNA_216 0.35 1.2
536,079 - 8584 mRNA_216 0.35 -1.6
536,087 + 8584 mRNA_216 0.36 0.9
536,091 + 8584 mRNA_216 0.36 -1.2
536,101 + 8584 mRNA_216 0.36 1.8
536,107 + 8584 mRNA_216 0.36 -0.2
536,107 + 8584 mRNA_216 0.36 0.4
536,120 + 8584 mRNA_216 0.37 0.2
536,129 - 8584 mRNA_216 0.37 1.0
536,131 + 8584 mRNA_216 0.37 -0.3
536,136 + 8584 mRNA_216 0.37 0.1
536,143 + 8584 mRNA_216 0.37 0.2
536,148 - 8584 mRNA_216 0.38 0.5
536,148 - 8584 mRNA_216 0.38 -0.7
536,151 + 8584 mRNA_216 0.38 -0.8
536,163 - 8584 mRNA_216 0.38 0.3
536,171 - 8584 mRNA_216 0.38 -0.7
536,175 + 8584 mRNA_216 0.38 0.1
536,195 - 8584 mRNA_216 0.39 3.0
536,332 + 8584 mRNA_216 0.43 -1.1
536,333 + 8584 mRNA_216 0.43 1.1
536,345 - 8584 mRNA_216 0.44 -0.4
536,350 - 8584 mRNA_216 0.44 -1.5
536,367 - 8584 mRNA_216 0.44 -1.3
536,495 - 8584 mRNA_216 0.48 0.4
536,501 - 8584 mRNA_216 0.48 0.4
536,502 - 8584 mRNA_216 0.48 -0.2
536,728 - 8584 mRNA_216 0.55 1.6
536,792 - 8584 mRNA_216 0.57 0.0
536,905 - 8584 mRNA_216 0.60 0.4
537,206 - 8584 mRNA_216 0.70 0.1
537,366 + 8584 mRNA_216 0.74 -0.7
537,839 - 8584 mRNA_216 0.89 0.8
537,843 + 8584 mRNA_216 0.89 0.7
537,845 - 8584 mRNA_216 0.89 1.1
537,886 + -0.3
538,098 - 0.3
538,514 + 0.1
538,819 + 8585 mRNA_217 0.11 -0.3
539,117 - 8585 mRNA_217 0.24 -3.1