Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_88

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_87: 8455 - BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous], at 207025 to 210193 8455 mRNA_88: 8456 - K17361 ACOT9 acyl-coenzyme A thioesterase 9, at 210659 to 212272 8456

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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209,692 - 8455 mRNA_87 0.84 0.2
209,713 + 8455 mRNA_87 0.85 -1.0
209,740 - 8455 mRNA_87 0.86 -0.1
209,807 + 8455 mRNA_87 0.88 0.1
209,891 + -0.0
210,158 - -0.1
210,162 + 0.5
210,167 - -1.8
210,173 - -0.3
210,176 + -2.2
210,179 - -0.8
210,179 - 0.5
210,307 + 0.5
210,320 - 3.0
210,321 - 0.6
210,337 + 1.7
210,345 + 0.2
210,368 - 0.2
210,399 - 2.0
210,407 - 0.2
210,418 + -0.4
210,431 + 1.5
210,439 - -0.4
210,449 - -0.4
210,453 - -0.7
210,460 - 0.2
210,476 - -1.1
210,487 + -0.8
210,546 - -0.8
210,568 + -1.1
210,579 + -1.6
210,593 - 0.0
210,600 + 0.3
210,603 - 0.8
210,604 + -0.6
210,610 - -1.8
210,628 + 1.7
210,630 + 0.2
210,637 + -2.2
210,639 - -0.4
210,639 + -0.9
210,645 + 0.4
210,654 - -0.2
210,662 + 0.8
210,663 + -2.2
210,672 + -1.9
210,684 - 0.7
210,772 + -1.2
210,794 + -1.5
210,797 - 1.4
211,078 + 8456 mRNA_88 0.26 0.1
211,503 + 8456 mRNA_88 0.52 -0.0
211,523 + 8456 mRNA_88 0.54 0.2
211,771 - 8456 mRNA_88 0.69 0.2
211,778 + 8456 mRNA_88 0.69 0.1
212,220 + -2.1
212,226 + -0.1
212,375 - -0.5
212,410 - 0.7
212,494 + -0.2
212,502 - 0.4
212,504 - -0.4
212,508 + -0.1
212,512 - -1.1
212,524 + -0.1
212,544 - 0.5
212,623 + -0.5
212,623 + 1.1
212,641 + 0.6
212,645 + 0.7
212,652 + 1.0
212,652 - 0.2
212,658 + -1.1
212,663 - 0.0
212,669 + -1.8
212,670 - 0.4
212,677 - -0.6
212,695 - -1.6
212,695 + 0.1
212,801 - -0.2
212,807 + -0.8
212,811 + 0.1
212,821 + -0.1
212,835 - 0.7
212,844 - 0.4
212,853 + -2.2
212,855 + -0.7
212,873 + 0.6
212,875 - 0.1
212,880 + -0.2
212,880 + 0.1
212,900 - -0.6
212,901 - 1.5
212,906 - -0.6
212,933 - 0.2
212,940 - -3.1
212,950 - -1.4
212,961 - -0.0
212,983 + -0.4
213,005 - 1.2
213,025 - 1.5
213,029 + 0.3
213,039 - 1.0
213,043 + 1.1
213,053 + -0.3
213,059 - -0.9
213,066 - 0.3
213,067 + 0.4
213,073 + -0.1
213,074 + -0.8
213,099 + -0.6
213,110 - 0.6
213,112 + 0.5
213,118 + 1.4
213,122 + 0.2
213,125 - 0.4
213,126 + -1.0
213,126 + 1.6
213,127 - -0.4
213,139 + -0.4
213,141 - 1.1
213,156 + -0.6
213,158 + -0.5
213,159 + 0.4
213,165 - -2.0
213,168 - -0.5
213,175 - 1.2