Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8416

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8415: 16783 - Hypothetical Protein, at 1166198 to 1166736 16783 mRNA_8416: 16784 - BLAST Protein byr4 [Hypsizygus marmoreus], at 1167455 to 1171070 16784 mRNA_8417: 16785 - Hypothetical Protein, at 1171462 to 1173303 16785

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,166,672 + 16783 mRNA_8415 0.88 -0.8
1,166,780 - 0.8
1,166,793 - 1.1
1,167,096 + -0.0
1,167,131 + 0.2
1,167,133 - 0.2
1,167,135 - 1.2
1,167,154 - -1.0
1,167,254 - 1.1
1,167,311 + -1.3
1,167,380 - -1.3
1,167,416 + 0.7
1,167,564 - -0.8
1,167,727 - 0.9
1,167,728 - -0.4
1,168,152 - 16784 mRNA_8416 0.19 0.3
1,168,152 + 16784 mRNA_8416 0.19 0.2
1,168,174 - 16784 mRNA_8416 0.20 -0.3
1,168,215 + 16784 mRNA_8416 0.21 2.5
1,168,218 - 16784 mRNA_8416 0.21 -2.5
1,168,233 - 16784 mRNA_8416 0.22 1.8
1,168,454 + 16784 mRNA_8416 0.28 -0.8
1,168,472 - 16784 mRNA_8416 0.28 0.4
1,168,491 + 16784 mRNA_8416 0.29 0.4
1,168,494 - 16784 mRNA_8416 0.29 0.3
1,168,494 - 16784 mRNA_8416 0.29 0.2
1,168,497 - 16784 mRNA_8416 0.29 0.1
1,168,638 + 16784 mRNA_8416 0.33 -1.0
1,168,730 + 16784 mRNA_8416 0.35 -0.0
1,168,806 - 16784 mRNA_8416 0.37 -0.0
1,168,946 + 16784 mRNA_8416 0.41 -0.1
1,168,978 + 16784 mRNA_8416 0.42 -0.9
1,169,033 - 16784 mRNA_8416 0.44 -0.5
1,169,039 + 16784 mRNA_8416 0.44 -0.1
1,169,042 + 16784 mRNA_8416 0.44 -0.5
1,169,170 + 16784 mRNA_8416 0.47 0.1
1,169,201 + 16784 mRNA_8416 0.48 -1.6
1,169,203 - 16784 mRNA_8416 0.48 0.8
1,169,204 + 16784 mRNA_8416 0.48 0.7
1,169,209 - 16784 mRNA_8416 0.49 -1.2
1,169,209 + 16784 mRNA_8416 0.49 -1.5
1,169,242 + 16784 mRNA_8416 0.49 -0.2
1,169,242 + 16784 mRNA_8416 0.49 0.7
1,169,326 - 16784 mRNA_8416 0.52 1.1
1,169,338 - 16784 mRNA_8416 0.52 -0.2
1,169,339 - 16784 mRNA_8416 0.52 -0.2
1,169,346 - 16784 mRNA_8416 0.52 0.9
1,169,489 + 16784 mRNA_8416 0.56 -1.6
1,169,550 + 16784 mRNA_8416 0.58 -0.1
1,169,884 + 16784 mRNA_8416 0.67 0.9
1,169,892 - 16784 mRNA_8416 0.67 0.1
1,170,366 - 16784 mRNA_8416 0.81 0.4
1,170,481 - 16784 mRNA_8416 0.84 0.6
1,170,517 + 16784 mRNA_8416 0.85 -0.4
1,170,517 - 16784 mRNA_8416 0.85 0.9
1,170,594 - 16784 mRNA_8416 0.87 -1.4
1,170,594 - 16784 mRNA_8416 0.87 -0.2
1,170,643 - 16784 mRNA_8416 0.88 0.2
1,170,657 - 16784 mRNA_8416 0.89 -0.9
1,170,695 + 16784 mRNA_8416 0.90 -0.3
1,170,808 - 1.3
1,170,828 - 0.8
1,170,987 - -1.0
1,171,002 - 1.5
1,171,084 - 0.1
1,171,119 + 1.4
1,171,143 + 0.9
1,171,154 + -0.6
1,171,179 - 1.2
1,171,194 - -0.9
1,171,201 - 0.9
1,171,543 + -2.4
1,171,549 + 2.5
1,171,552 - 2.2
1,171,562 + -2.9
1,171,684 - 16785 mRNA_8417 0.12 -0.3
1,172,032 + 16785 mRNA_8417 0.31 -1.1