Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8345

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984444 to 989069 16712 mRNA_8345: 16713 - K00062 E1.1.1.116 D-arabinose 1-dehydrogenase, at 989216 to 990816 16713 mRNA_8346: 16714 - Hypothetical Protein, at 991012 to 994561 16714

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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988,531 + 16712 mRNA_8344 0.88 -2.6
988,671 - -2.8
988,825 - -1.7
988,833 - -2.7
988,988 + -3.1
989,272 - 1.9
989,274 + -0.1
989,275 + -0.6
989,387 - 16713 mRNA_8345 0.11 -0.0
989,389 - 16713 mRNA_8345 0.11 -1.4
989,393 - 16713 mRNA_8345 0.11 -0.3
989,418 + 16713 mRNA_8345 0.13 0.3
989,426 - 16713 mRNA_8345 0.13 -1.9
989,593 - 16713 mRNA_8345 0.24 1.8
989,595 - 16713 mRNA_8345 0.24 1.1
990,429 + 16713 mRNA_8345 0.76 -0.4
990,552 - 16713 mRNA_8345 0.83 0.9
990,992 - 0.7
991,003 + -1.0
991,039 + 0.3
991,323 + -0.0
991,420 + 16714 mRNA_8346 0.11 0.1
991,448 - 16714 mRNA_8346 0.12 2.1
991,752 - 16714 mRNA_8346 0.21 -0.7