Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8333

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8332: 16700 - K10082 LMAN2, VIP36 lectin, mannose-binding 2, at 956796 to 958192 16700 mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701 mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238 16702

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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957,654 - 16700 mRNA_8332 0.61 1.1
957,795 - 16700 mRNA_8332 0.72 0.7
957,912 + 16700 mRNA_8332 0.80 0.4
957,915 - 16700 mRNA_8332 0.80 1.2
958,060 - 0.2
958,061 + -0.3
958,066 - -1.3
958,087 + 0.4
958,147 - 0.5
958,230 + -0.3
958,231 - -1.6
958,359 - 0.4
958,384 - -0.2
958,385 + 0.7
958,485 - 0.4
958,669 - 0.3
958,670 + 1.3
958,833 + 16701 mRNA_8333 0.15 0.8
959,139 - 16701 mRNA_8333 0.31 1.2
959,263 + 16701 mRNA_8333 0.37 -2.0
960,148 + 16701 mRNA_8333 0.84 0.4
960,155 - 16701 mRNA_8333 0.84 -0.5
960,270 - 0.3
960,446 + 0.9
960,569 - 1.9
960,577 + -0.4
960,597 - 0.6
960,611 - -0.1
960,616 + 0.8
960,706 + -0.1
960,753 + -0.7
960,755 + -1.0
960,757 + 2.1
960,767 - 0.6
960,767 + -0.2
960,768 + -0.3
960,774 + -1.7
960,774 + 0.3
960,775 + -0.8
960,777 - -3.5
960,780 + -0.0
960,784 - -0.0
960,784 - 0.7
960,785 + 0.2
960,785 + 0.4
960,787 - 0.5
960,795 - 1.2
960,796 + -1.3
960,797 - -0.1
960,801 + -0.2
960,802 + 0.0
960,805 + -0.7
960,805 + 0.2
960,810 + 0.5
960,811 - -0.1
960,813 - 1.5
960,822 + -0.4
960,825 + 0.3
960,834 - 0.4
960,836 + -1.1
960,847 + 0.0
960,852 - -0.8
960,861 - 1.0
960,868 - 1.3
960,870 - 0.7
960,872 - 0.5
960,873 - 0.2
960,887 + -0.2
960,919 - 0.6
960,922 + -0.7
960,925 - 1.8
960,927 - -0.6
960,930 + 0.1
960,933 + -0.5
960,935 - 0.1
960,938 - 0.6
960,939 + -0.4
960,948 + -1.1
960,949 + -0.1
960,952 - -0.9
960,952 - 1.2
960,953 + 1.3
960,955 + -1.0
960,955 - 0.5
960,957 + 0.8
960,989 + -0.7
960,999 + -2.1
961,027 + 1.7
961,042 - 0.1
961,064 - 0.1
961,211 + 2.2
961,257 - -1.1
961,333 - 1.6