Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7834

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7833: 16201 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1168816 to 1171622 16201 mRNA_7834: 16202 - HMMPfam-Sulfate transporter family-PF00916,HMMPfam-STAS domain-PF01740,HMMPfam-Sulfate transporter N-terminal domain with GLY motif-PF13792,ProSiteProfiles-STAS domain profile.-PS50801,SUPERFAMILY--SSF52091, at 1172095 to 1175017 16202 mRNA_7835: 16203 - K01823 idi, IDI isopentenyl-diphosphate Delta-isomerase, at 1175445 to 1176627 16203

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,171,122 - 16201 mRNA_7833 0.82 0.1
1,171,681 - 0.5
1,171,685 + 0.4
1,171,705 - -0.0
1,171,715 - 0.1
1,171,833 - 0.5
1,171,836 - 0.1
1,171,847 - 0.1
1,171,848 - 0.1
1,171,850 + -0.1
1,171,851 + 0.2
1,171,856 - -0.5
1,171,858 + 0.4
1,171,858 - -0.6
1,171,862 + 0.4
1,171,872 - 1.0
1,171,994 - -0.9
1,172,006 - 0.1
1,172,011 - -0.8
1,172,015 - 0.7
1,172,114 - 0.9
1,172,146 - -0.5
1,172,181 + 0.2
1,172,196 + -0.8
1,172,247 + 0.5
1,172,263 - -0.2
1,172,576 + 16202 mRNA_7834 0.16 0.6
1,172,864 - 16202 mRNA_7834 0.26 0.6
1,172,983 - 16202 mRNA_7834 0.30 -0.3
1,173,016 + 16202 mRNA_7834 0.32 -0.9
1,173,045 + 16202 mRNA_7834 0.33 -0.0
1,173,048 - 16202 mRNA_7834 0.33 -0.4
1,173,157 + 16202 mRNA_7834 0.36 -2.1
1,173,176 + 16202 mRNA_7834 0.37 0.4
1,173,804 - 16202 mRNA_7834 0.58 -0.8
1,173,954 + 16202 mRNA_7834 0.64 0.6
1,174,763 - 0.1
1,174,784 - 0.5
1,174,909 - -0.4
1,174,928 + 0.5
1,174,931 + 0.5
1,175,045 - -1.1
1,175,059 - -0.6
1,175,072 + -0.3
1,175,076 - 1.6
1,175,320 + 1.0
1,175,343 - -0.1