Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7739

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7738: 16106 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 960464 to 961733 16106 mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962010 to 966625 16107 mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966858 to 968054 16108

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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961,150 + 16106 mRNA_7738 0.54 0.5
961,157 - 16106 mRNA_7738 0.55 0.8
961,215 + 16106 mRNA_7738 0.59 -0.9
961,584 + 16106 mRNA_7738 0.88 0.4
961,649 - -0.1
961,655 + -0.5
961,658 - 1.7
961,912 + -1.3
962,030 - -1.3
962,620 - 16107 mRNA_7739 0.13 -4.6
962,813 + 16107 mRNA_7739 0.17 -2.4
962,954 - 16107 mRNA_7739 0.20 -1.3
962,994 + 16107 mRNA_7739 0.21 -2.2
963,092 + 16107 mRNA_7739 0.23 -5.1
963,433 + 16107 mRNA_7739 0.31 -1.1
963,525 + 16107 mRNA_7739 0.33 -2.1
963,529 - 16107 mRNA_7739 0.33 -3.3
963,573 + 16107 mRNA_7739 0.34 -3.9
963,806 + 16107 mRNA_7739 0.39 -3.7
963,978 + 16107 mRNA_7739 0.43 -0.2
963,990 + 16107 mRNA_7739 0.43 -2.6
964,006 - 16107 mRNA_7739 0.43 -2.8
964,007 + 16107 mRNA_7739 0.43 -2.6
964,097 - 16107 mRNA_7739 0.45 -2.6
964,283 + 16107 mRNA_7739 0.49 -0.8
965,172 + 16107 mRNA_7739 0.69 -0.1
965,195 + 16107 mRNA_7739 0.69 -3.4
965,437 + 16107 mRNA_7739 0.74 -0.3
965,935 - 16107 mRNA_7739 0.85 -4.9
966,019 + 16107 mRNA_7739 0.87 -4.0
966,040 - 16107 mRNA_7739 0.87 -2.6
966,048 + 16107 mRNA_7739 0.87 -3.7
966,106 - 16107 mRNA_7739 0.89 -1.9
966,150 - 16107 mRNA_7739 0.90 -1.8
966,156 + 16107 mRNA_7739 0.90 -1.7
966,204 - -1.8
966,204 - -2.8
966,220 + -1.5
966,242 - -3.3
966,246 + 0.1
966,350 + -3.1
966,400 - -2.3
966,510 + -4.4
966,759 + 0.2
966,763 + -0.4
966,768 + 0.1
966,935 - -1.1
966,949 - 0.1
966,997 + 16108 mRNA_7740 0.12 1.3
966,997 + 16108 mRNA_7740 0.12 -0.3
966,997 + 16108 mRNA_7740 0.12 -0.9
966,997 + 16108 mRNA_7740 0.12 -1.2
967,114 - 16108 mRNA_7740 0.21 -1.8
967,193 - 16108 mRNA_7740 0.28 -1.0
967,215 + 16108 mRNA_7740 0.30 0.4
967,288 + 16108 mRNA_7740 0.36 0.0