Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7539

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519946 to 522544 15907 mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522757 to 524526 15908

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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518,947 + 0.9
518,959 - 1.1
518,977 + -0.8
519,067 + -1.0
519,115 + -1.1
519,121 - 1.0
519,125 + 1.2
519,142 + 0.1
519,146 - 1.0
519,157 + -3.8
519,162 + -0.3
519,189 - -1.8
519,199 - 1.2
519,226 - 1.0
519,244 - -1.9
519,265 + 0.2
519,373 - -1.5
519,386 - -0.6
519,515 - -0.5
519,530 - -1.1
519,542 + -1.2
519,550 - -2.2
519,552 - -0.5
519,554 + 0.8
519,692 - 0.7
520,117 - 1.9
520,573 + 15907 mRNA_7539 0.24 0.3
521,159 - 15907 mRNA_7539 0.47 -1.4
521,404 - 15907 mRNA_7539 0.56 -0.5
521,446 + 15907 mRNA_7539 0.58 0.6
521,453 + 15907 mRNA_7539 0.58 -3.3
521,827 - 15907 mRNA_7539 0.72 -0.3
522,156 + 15907 mRNA_7539 0.85 -1.7
522,287 + 0.8
522,303 - 0.2
522,387 - -2.3
522,402 - 0.8
522,451 - 0.2
522,484 + 0.6
522,623 - 0.1
522,625 + -0.1
522,627 + -0.7
522,628 + 0.2
522,630 - -1.4
522,633 + -1.0
522,646 + 1.2
522,653 - -0.4
522,659 + -0.1
522,671 + -0.0
522,682 - 1.1
522,786 - 0.1
522,811 - -0.5