Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7485

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392851 to 393989 15852 mRNA_7485: 15853 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 394901 to 397101 15853 mRNA_7486: 15854 - K08287 E2.7.12.1 dual-specificity kinase, at 397692 to 399920 15854

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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393,966 - -0.5
393,982 + -1.3
393,983 - -0.4
393,984 + -1.8
393,988 + 0.5
394,000 + -0.8
394,114 - -1.6
394,116 - -0.7
394,134 + 0.7
394,139 + 0.2
394,154 + 1.1
394,262 - 0.9
394,264 - 0.1
394,283 - -0.5
394,285 - -2.2
394,299 - -1.0
394,302 - -0.1
394,306 + 0.8
394,310 + -0.1
394,313 + 0.6
394,324 + 0.3
394,435 + 0.3
394,473 + -0.3
394,598 + -1.0
394,602 + -0.1
394,620 + -0.1
394,891 + 0.8
394,898 + -0.2
395,011 + 1.4
395,794 + 15853 mRNA_7485 0.41 -0.2
395,882 - 15853 mRNA_7485 0.45 1.0
395,887 - 15853 mRNA_7485 0.45 -0.8
396,325 - 15853 mRNA_7485 0.65 1.3
396,523 + 15853 mRNA_7485 0.74 -0.0
396,655 - 15853 mRNA_7485 0.80 -0.5
396,834 - 15853 mRNA_7485 0.88 -0.2
396,963 + 0.4
397,419 + 0.7
397,569 - -0.1
397,592 + 0.1
397,728 + 0.9
397,810 + -1.7
397,887 - -2.2